RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TP53BP2Q13625 1128 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 SWT1Q5T5J6 900 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CACHD1Q5VU97 1274 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ARRDC4Q8NCT1 418 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 FAM81AQ8TBF8 368 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ZNF483Q8TF39 744 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.49□□□□□ -0.733e-6■■■■□ 22.8
GTF3C1-202ENST00000561623 NYAP2Q9P242 653 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 DNPEPQ9ULA0 475 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 PCDHB7Q9Y5E2 793 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ZC3H4Q9UPT8 1303 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 EME2A4GXA9 379 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 TNFRSF8P28908 595 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ST8SIA6P61647 398 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 RAD51Q06609 339 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 RRP1BQ14684 758 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 PDIA6Q15084 440 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 ZNF618Q5T7W0 954 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CES3Q6UWW8 571 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 NANOGNBQ7Z5D8 188 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 C19orf18Q8NEA5 215 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 MAGEB10Q96LZ2 347 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 CEP44Q9C0F1 390 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 SPATA31A3Q5VYP0 1347 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 MYO3AQ8NEV4 1616 aa10.49□□□□□ -0.73
GTF3C1-202ENST00000561623 GJB6O95452 261 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CAPN1P07384 714 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CNTFP26441 200 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ACADSBP45954 432 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 DDX39BQ13838 428 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 SLC44A2Q8IWA5 706 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MARK4Q96L34 752 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 PPP1R10Q96QC0 940 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 RIT2Q99578 217 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CATSPERBQ9H7T0 1116 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 STARD13Q9Y3M8 1113 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 KANSL1LA0AUZ9 987 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 VWA5AO00534 786 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CSDE1O75534 798 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 FCGR1AP12314 374 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ETS1P14921 441 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ME2P23368 584 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 PRIM2P49643 509 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 RGS4P49798 205 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ALDH6A1Q02252 535 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 C16orf46Q6P387 395 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MARK2Q7KZI7 788 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 LRRC39Q96DD0 335 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MUC3BQ9H195 1237 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 EPS8L2Q9H6S3 715 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CROTQ9UKG9 612 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 PCDHA3Q9Y5H8 950 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 IRF1P10914 325 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ANPEPP15144 967 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CCT8P50990 548 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 FASTKQ14296 549 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 GLRA4Q5JXX5 417 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MCOLN2Q8IZK6 566 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ARL10Q8N8L6 244 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 SPASTQ9UBP0 616 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 SHOC2Q9UQ13 582 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ALKQ9UM73 1620 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ADCY6O43306 1168 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 NPTXRO95502 500 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CPSF4O95639 269 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CETPP11597 493 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CCDC130P13994 396 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ATP6V1C1P21283 382 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 KPNA1P52294 538 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MPP3Q13368 585 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 EML3Q32P44 896 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 PERM1Q5SV97 790 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 NCKIPSDQ9NZQ3 722 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 TRMT6Q9UJA5 497 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ACOT9Q9Y305 439 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CAMTA2O94983 1202 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ALADP13716 330 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 KLRK1P26718 216 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MCL1Q07820 350 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 RNF43Q68DV7 783 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ANKS3Q6ZW76 656 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 C11orf96Q7Z7L8 435 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 KAZALD1Q96I82 304 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 RNF145Q96MT1 663 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MMADHCQ9H3L0 296 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 SPATA2Q9UM82 520 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 SLCO1B7G3V0H7 640 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 HS6ST1O60243 411 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 ANXA9O76027 345 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 SAPCD2Q86UD0 394 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 COLGALT1Q8NBJ5 622 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 MRPS26Q9BYN8 205 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 FHDC1Q9C0D6 1143 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 RRN3Q9NYV6 651 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 SPHKAPQ2M3C7 1700 aa10.48□□□□□ -0.73
GTF3C1-202ENST00000561623 CNOT3O75175 753 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-202ENST00000561623 TPH1P17752 444 aa10.47□□□□□ -0.73
GTF3C1-202ENST00000561623 MZF1P28698 734 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-202ENST00000561623 PDK2Q15119 407 aa10.47□□□□□ -0.73
GTF3C1-202ENST00000561623 STK32CQ86UX6 486 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms