RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PLCB3Q01970 1234 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 POU5F1BQ06416 359 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 SPIDRQ14159 915 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 TRIP13Q15645 432 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF792Q3KQV3 632 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 SLC44A4Q53GD3 710 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 GJC2Q5T442 439 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 UGT2A3Q6UWM9 527 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 TMEM192Q8IY95 271 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 WDTC1Q8N5D0 677 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 GPRC5AQ8NFJ5 357 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 GTF3C2Q8WUA4 911 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 MAK16Q9BXY0 300 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 MRPS26Q9BYN8 205 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 IFT122Q9HBG6 1241 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 USP29Q9HBJ7 922 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 KCNK4Q9NYG8 393 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 PPM1HQ9ULR3 514 aa14.47□□□□□ -0.09
RABGGTA-220ENST00000560998 H3BRJ5 948 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 GPR25O00155 361 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 KLF11O14901 512 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 PHKA2P46019 1235 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 YWHAEP62258 255 aaKnown RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF252P-AS1Q0IIN9 211 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 TBL3Q12788 808 aaKnown RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 OVGP1Q12889 678 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 PRKD1Q15139 912 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 FAM187BQ17R55 369 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 MMEL1Q495T6 779 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 CCDC92Q53HC0 331 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 DNAJC24Q6P3W2 148 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 MAMDC4Q6UXC1 1216 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 RBM44Q6ZP01 1051 aaKnown RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 LINC01465Q8N7H1 131 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 RBM15BQ8NDT2 890 aaKnown RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 SLC35B4Q969S0 331 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 PWWP2AQ96N64 755 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 RBM38Q9H0Z9 239 aaKnown RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 Q9H521 79 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 SLC7A8Q9UHI5 535 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 SIX4Q9UIU6 781 aa14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 BARX2Q9UMQ3 279 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-220ENST00000560998 hCG_2014768A0A024R1R8 64 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 DNALI1O14645 258 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 NFICP08651 508 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 PHBP35232 272 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 GJC1P36383 396 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 EMP3P54852 163 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 AMHR2Q16671 573 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 KLHDC10Q6PID8 442 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 NCCRP1Q6ZVX7 275 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 MARVELD2Q8N4S9 558 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 FNDC8Q8TC99 324 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 DDI1Q8WTU0 396 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 SLC10A4Q96EP9 437 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 VTA1Q9NP79 307 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 FAIMQ9NVQ4 179 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 C15orf38-AP3S2A0A0A6YYH1 394 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 RBM47A0AV96 593 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 LACTBL1A8MY62 500 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 CASQ2O14958 399 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 ALOX15BO15296 676 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 ZNF189O75820 626 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 CLPTM1O96005 669 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 DHRS4L1P0CG22 281 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 MCF2P10911 925 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 TCF4P15884 667 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 ADORA2AP29274 412 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 VPS41P49754 854 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 ARL4CP56559 192 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 CCNA1P78396 465 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 OGDHQ02218 1023 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 TAP1Q03518 808 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 MSLNQ13421 630 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 MORF4L2Q15014 288 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 KLHL38Q2WGJ6 581 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 LRRC38Q5VT99 294 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 DUS1LQ6P1R4 473 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 DENND1BQ6P3S1 775 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 ARPINQ7Z6K5 226 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 RCOR2Q8IZ40 523 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 BANPQ8N9N5 519 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 PPTC7Q8NI37 304 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 ABTB1Q969K4 478 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 MCEEQ96PE7 176 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 LBHD1Q9BQE6 289 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 BCO2Q9BYV7 579 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 VPS37BQ9H9H4 285 aa14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 NXF1Q9UBU9 619 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-220ENST00000560998 A0A087WZ62 844 aa14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 DENRO43583 198 aaKnown RBP14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 OR6B1O95007 311 aa14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 KRT19P08727 400 aa14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 STAG3L1P0CL83 205 aa14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 RAP1GAPP47736 663 aa14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 TNFAIP2Q03169 654 aa14.44□□□□□ -0.1
RABGGTA-220ENST00000560998 NFX1Q12986 1120 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms