RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CHURC1-FNTBB4DL54 471 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 E5RJQ4 531 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 K7EQS6 105 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 MSI1O43347 362 aaKnown RBP13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 GREM1O60565 184 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 TULP3O75386 442 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 GABBR2O75899 941 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 KLKB1P03952 638 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 UCHL3P15374 230 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 TIE1P35590 1138 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 GRIA2P42262 883 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 PXNP49023 591 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 FNTBP49356 437 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 MEA1Q16626 185 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 C10orf76Q5T2E6 689 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 GRAMD4Q6IC98 578 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 Q6ZNB5 142 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 CCDC33Q8N5R6 958 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 STK32AQ8WU08 396 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 EZH1Q92800 747 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 TRIM62Q9BVG3 475 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 FAM207AQ9NSI2 230 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 POLR3BQ9NW08 1133 aaPredicted RBP13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 AGO1Q9UL18 857 aaKnown RBP13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 RAB23Q9ULC3 237 aa13.55□□□□□ -0.24
CTDSPL2-209ENST00000560620 FAM170AA1A519 330 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 K7ESF4 209 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 CLCN1P35523 988 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 DGKGP49619 791 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 KLK7P49862 253 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 COPB1P53618 953 aaKnown RBP13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 SNX16P57768 344 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 UBXN1Q04323 297 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 DMWDQ09019 674 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 MESP2Q0VG99 397 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 PDCLQ13371 301 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 DMC1Q14565 340 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 TAF3Q5VWG9 929 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 LONP2Q86WA8 852 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 SFTPA1Q8IWL2 248 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 ZBTB44Q8NCP5 570 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 DDI1Q8WTU0 396 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 HHIPQ96QV1 700 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 PLCB1Q9NQ66 1216 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 CYTH4Q9UIA0 394 aa13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 HBS1LQ9Y450 684 aaKnown RBP13.54□□□□□ -0.24
CTDSPL2-209ENST00000560620 MYO15AQ9UKN7 3530 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 SMTNL1A8MU46 457 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 TRIM24O15164 1050 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 CACNG3O60359 315 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 TSPAN3O60637 253 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 PAPSS2O95340 614 aaPredicted RBP13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 KLF8O95600 359 aaPredicted RBP13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 TDGF1P13385 188 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 HOXC13P31276 330 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 TNFRSF4P43489 277 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 TBX4P57082 545 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 POLR2FP61218 127 aaKnown RBP13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 MRPS21P82921 87 aaKnown RBP13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 TRIP4Q15650 581 aaPredicted RBP13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 LPAL2Q16609 132 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 EMC10Q5UCC4 262 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 OR6B2Q6IFH4 312 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 CEP68Q76N32 757 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 ETFBKMTQ8IXQ9 262 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 FAM71AQ8IYT1 594 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 ALLCQ8N6M5 410 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 TERB1Q8NA31 727 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 NEK11Q8NG66 645 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 ADAM32Q8TC27 787 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 USP33Q8TEY7 942 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 SLC4A5Q9BY07 1137 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 STK33Q9BYT3 514 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 POPDC2Q9HBU9 364 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 ZDHHC4Q9NPG8 344 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 NLRC4Q9NPP4 1024 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 MARK1Q9P0L2 795 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 NCDNQ9UBB6 729 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 LIMA1Q9UHB6 759 aaKnown RBP13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 PCDHGC3Q9UN70 934 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 NAALADL1Q9UQQ1 740 aa13.53□□□□□ -0.24
CTDSPL2-209ENST00000560620 ANTXRLA6NF34 631 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 F8VZ95 297 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 PAPSS1O43252 624 aaPredicted RBP13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 GFPT2O94808 682 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 CYP11B1P15538 503 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 PTMSP20962 102 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC11A2P49281 568 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZNF165P49910 485 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 DGKEP52429 567 aa13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 SRSF5Q13243 272 aaKnown RBP13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 SIM2Q14190 667 aaPredicted RBP13.52□□□□□ -0.25
CTDSPL2-209ENST00000560620 SYCP1Q15431 976 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms