RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 CISD3P0C7P0 127 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 CNGA2Q16280 664 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 CAMK4Q16566 473 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 PLA2G2CQ5R387 149 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 C10orf76Q5T2E6 689 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 GRAMD4Q6IC98 578 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 TOGARAM2Q6ZUX3 1019 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 RRAGAQ7L523 313 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 RBBP8NLQ8NC74 664 aaPredicted RBP16.97■□□□□ 0.31
SPG21-211ENST00000560564 ARRDC1-AS1Q9H2J1 176 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 LRRC4Q9HBW1 653 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 CD248Q9HCU0 757 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 DNAJC17Q9NVM6 304 aaKnown RBP16.97■□□□□ 0.31
SPG21-211ENST00000560564 MARCH2Q9P0N8 246 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 RWDD2AQ9UIY3 292 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 ZNF510Q9Y2H8 683 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.97■□□□□ 0.31
SPG21-211ENST00000560564 CEP192Q8TEP8 1941 aa16.97■□□□□ 0.31
SPG21-211ENST00000560564 ACACBO00763 2458 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 CKAP5Q14008 2032 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 PRRT4C9JH25 899 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 BRD2P25440 801 aaKnown RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 CORO1AP31146 461 aaKnown RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 ATXN1P54253 815 aaKnown RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 DAOAP59103 153 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 CETN1Q12798 172 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 PREPLQ4J6C6 727 aaPredicted RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 EOGTQ5NDL2 527 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 FYB2Q5VWT5 728 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 PMF1Q6P1K2 205 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 IRF2BP1Q8IU81 584 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 FAM217AQ8IXS0 508 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 ZNF513Q8N8E2 541 aaPredicted RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 XPO6Q96QU8 1125 aaKnown RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 DCLK3Q9C098 648 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 INTS2Q9H0H0 1204 aaKnown RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 CNGB3Q9NQW8 809 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 PLK2Q9NYY3 685 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 AGO1Q9UL18 857 aaKnown RBP16.96■□□□□ 0.31
SPG21-211ENST00000560564 PCDHGA5Q9Y5G8 931 aa16.96■□□□□ 0.31
SPG21-211ENST00000560564 CACNA1EQ15878 2313 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 GFRA2O00451 464 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 GDF9O60383 454 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 ZNF806P0C7X5 589 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 BCKDHBP21953 392 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 STILQ15468 1287 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 TRIP4Q15650 581 aaPredicted RBP16.95■□□□□ 0.3
SPG21-211ENST00000560564 BSPRYQ5W0U4 402 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 EGFLAMQ63HQ2 1017 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 PMS2CLQ68D20 193 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 DGLUCYQ7Z3D6 616 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 CPXM2Q8N436 756 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 ACOX2Q99424 681 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 SLC27A6Q9Y2P4 619 aa16.95■□□□□ 0.3
SPG21-211ENST00000560564 CHD8Q9HCK8 2581 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 A0A1W2PQF6 199 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 SLC12A8A0AV02 714 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 HMBSP08397 361 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 SDHBP21912 280 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 NTSR1P30989 418 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 CHKAP35790 457 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 RPL34P49207 117 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 DGKGP49619 791 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 RGS7P49802 495 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 CCDC6Q16204 474 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 USP39Q53GS9 565 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 MSANTD2Q6P1R3 559 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 RSRC2Q7L4I2 434 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 TRMT11Q7Z4G4 463 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 DENND1CQ8IV53 801 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 FMNL3Q8IVF7 1028 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 SIX6OS1Q8N1H7 587 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 NETO1Q8TDF5 533 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 EDEM1Q92611 657 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 BHMTQ93088 406 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 PLD4Q96BZ4 506 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 IPO9Q96P70 1041 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 RXFP3Q9NSD7 469 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 OLA1Q9NTK5 396 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 CDV3Q9UKY7 258 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 STRIP2Q9ULQ0 834 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 INVSQ9Y283 1065 aa16.94■□□□□ 0.3
SPG21-211ENST00000560564 HBS1LQ9Y450 684 aaKnown RBP16.94■□□□□ 0.3
SPG21-211ENST00000560564 ASCC3Q8N3C0 2202 aaKnown RBP16.93■□□□□ 0.3
SPG21-211ENST00000560564 MED19A0JLT2 244 aaPredicted RBP16.93■□□□□ 0.3
SPG21-211ENST00000560564 M0QYV0 167 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 SLC30A4O14863 429 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 ALDH1A2O94788 518 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 LCP1P13796 627 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 MPLP40238 635 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 P2RY2P41231 377 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 MFAP3P55082 362 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 SF3A2Q15428 464 aaKnown RBP16.93■□□□□ 0.3
SPG21-211ENST00000560564 ELF2Q15723 593 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 MAP7D1Q3KQU3 841 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 NUDT18Q6ZVK8 323 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 C11orf74Q86VG3 221 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 CLEC4CQ8WTT0 213 aa16.93■□□□□ 0.3
SPG21-211ENST00000560564 IRGQQ8WZA9 623 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms