RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 RAB24Q969Q5 203 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SKA1Q96BD8 255 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 TNIP3Q96KP6 325 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 UBAC1Q9BSL1 405 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 NRDE2Q9H7Z3 1164 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ATP8A2Q9NTI2 1148 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 MCM9Q9NXL9 1143 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 SAGE1Q9NXZ1 904 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 CHST2Q9Y4C5 530 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 PCDHA13Q9Y5I0 950 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 MROH7-TTC4A0A0A0MT08 1334 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 RPTORQ8N122 1335 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 STK36Q9NRP7 1315 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 ATRNL1Q5VV63 1379 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 CHD4Q14839 1912 aa4.86□□□□□ -1.63
TMOD3-207ENST00000560549 MYH7P12883 1935 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 BRCA1P38398 1863 aaKnown RBP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 KIAA1551Q9HCM1 1747 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 DUOX1Q9NRD9 1551 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 GPR75-ASB3A0A0A6YYF3 556 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 ZNF185O15231 689 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 LPXNO60711 386 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 MMP1P03956 469 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 ADH4P08319 380 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 PFKFB1P16118 471 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 RHCEP18577 417 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 CMA1P23946 247 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 BTDP43251 543 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 TM4SF4P48230 202 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 RCAN1P53805 252 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 SLC16A1P53985 500 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 TFAP4Q01664 338 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 RHDQ02161 417 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 TARDBPQ13148 414 aaKnown RBP eCLIP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 NOMO1Q15155 1222 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 SPECC1Q5M775 1068 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 SYNE3Q6ZMZ3 975 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 TMTC3Q6ZXV5 915 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 RASGRP2Q7LDG7 609 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 ZSCAN30Q86W11 494 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 MAPKAPK5Q8IW41 473 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 DRC7Q8IY82 874 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 DIS3L2Q8IYB7 885 aaKnown RBP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 CCDC89Q8N998 374 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 NSUN6Q8TEA1 469 aaKnown RBP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 SLC25A43Q8WUT9 341 aaPredicted RBP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 MRPS27Q92552 414 aaKnown RBP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 TRIM44Q96DX7 344 aaPredicted RBP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 NDC1Q9BTX1 674 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 ADI1Q9BV57 179 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 VPS54Q9P1Q0 977 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 NOL7Q9UMY1 257 aaKnown RBP4.85□□□□□ -1.63
TMOD3-207ENST00000560549 HPSEQ9Y251 543 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 HS3ST4Q9Y661 456 aa4.85□□□□□ -1.63
TMOD3-207ENST00000560549 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.85□□□□□ -1.635e-6■■■□□ 14.7
TMOD3-207ENST00000560549 TCHHQ07283 1943 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 ANKRD31Q8N7Z5 1873 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 FAM205AQ6ZU69 1335 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 FAM237AA0A1B0GTK4 181 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 ERICH2A1L162 156 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 LRRC14BA6NHZ5 514 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 H3BML4 177 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 FOXN1O15353 648 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 AKR1B10O60218 316 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 TUSC2O75896 110 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 SCAF4O95104 1147 aaKnown RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 DEXIO95424 95 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 AMY1AP04745 511 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 CRHR1P34998 444 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 GSTO1P78417 241 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 BIRC3Q13489 604 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 ELF2Q15723 593 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 PGS1Q32NB8 556 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 CCDC93Q567U6 631 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 SWSAP1Q6NVH7 229 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 MZT2AQ6P582 158 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 CPLX2Q6PUV4 134 aaKnown RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 SASS6Q6UVJ0 657 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 CCDC73Q6ZRK6 1079 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 USP49Q70CQ1 688 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 FOXP4Q8IVH2 680 aaPredicted RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 DHX40Q8IX18 779 aaKnown RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 C17orf53Q8N3J3 647 aaPredicted RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 KCNG4Q8TDN1 519 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 PIBF1Q8WXW3 757 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 ANKS1AQ92625 1134 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 ANP32BQ92688 251 aaKnown RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 LENG9Q96B70 501 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 PRRX2Q99811 253 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 CLIC5Q9NZA1 410 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 FNIP2Q9P278 1114 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 ARPP21Q9UBL0 812 aaPredicted RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 FBXO2Q9UK22 296 aaPredicted RBP4.84□□□□□ -1.63
TMOD3-207ENST00000560549 ATP6V0A2Q9Y487 856 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 PCDHAC2Q9Y5I4 1007 aa4.84□□□□□ -1.63
TMOD3-207ENST00000560549 DLEC1Q9Y238 1755 aa4.84□□□□□ -1.64
TMOD3-207ENST00000560549 GAKO14976 1311 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TSPY2A6NKD2 308 aa4.83□□□□□ -1.64
TMOD3-207ENST00000560549 TBKBP1A7MCY6 615 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms