RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 IL21RQ9HBE5 538 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 TM7SF3Q9NS93 570 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 COMMD8Q9NX08 183 aa11.06□□□□□ -0.64
CDC42BPB-207ENST00000560492 SHROOM3Q8TF72 1996 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 GFRA2O00451 464 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 BCAT2O15382 392 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 CYP26A1O43174 497 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 CILPO75339 1184 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 GJB3O75712 270 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 RARGP13631 454 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 ACO1P21399 889 aaKnown RBP11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 HOXD13P35453 343 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 PGFP49763 221 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 NCOA4Q13772 614 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 IL27RAQ6UWB1 636 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 SLCO6A1Q86UG4 719 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 FUKQ8N0W3 1084 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZNF516Q92618 1163 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 USP28Q96RU2 1077 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 SMOQ99835 787 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 KLF16Q9BXK1 252 aaPredicted RBP11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 CIPCQ9C0C6 399 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 EIF2B4Q9UI10 523 aaKnown RBP11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 RASAL2Q9UJF2 1139 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 DNMT3LQ9UJW3 386 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 NAGPAQ9UK23 515 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 PCOLCE2Q9UKZ9 415 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 UBE4BO95155 1302 aa11.05□□□□□ -0.64
CDC42BPB-207ENST00000560492 ACACAQ13085 2346 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 A0A1W2PQH9 124 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 TGFB1I1O43294 461 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 BEST1O76090 585 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 CYBBP04839 570 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZDHHC11BP0C7U3 371 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 OXTRP30559 389 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 PIK3CAP42336 1068 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 PLA2G4AP47712 749 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 TPMTP51580 245 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 NDST1P52848 882 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 SUZ12Q15022 739 aaKnown RBP11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 HLA-BQ31612 363 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 SERPINA13PQ6UXR4 307 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 PAQR9Q6ZVX9 377 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 ADAT2Q7Z6V5 191 aaKnown RBP11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 TADA2BQ86TJ2 420 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 MARCH9Q86YJ5 346 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 TMPRSS6Q8IU80 811 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 C12orf29Q8N999 325 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 ENGASEQ8NFI3 743 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZNF507Q8TCN5 953 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 CDC6Q99741 560 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 SDCBP2Q9H190 292 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 XYLT2Q9H1B5 865 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 SLC39A2Q9NP94 309 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 WSB2Q9NYS7 404 aaPredicted RBP11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 MARK1Q9P0L2 795 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 HMGXB4Q9UGU5 601 aa11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
CDC42BPB-207ENST00000560492 LOC400499M0QZD8 3231 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 CKAP5Q14008 2032 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 A0A1B0GVT2 93 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 FAM149AA5PLN7 773 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 KCNJ18B7U540 433 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 FLRT2O43155 660 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZIC2O95409 532 aaPredicted RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 EPHX1P07099 455 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 ATXN1LP0C7T5 689 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 RALAP11233 206 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 IL12RB1P42701 662 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 CSNK1EP49674 416 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 AP3M2P53677 418 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 SNRPFP62306 86 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 CYP4F3Q08477 520 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZNF234Q14588 700 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 E2F5Q15329 346 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 TEAD4Q15561 434 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 RSRC2Q7L4I2 434 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 EPM2AIP1Q7L775 607 aaPredicted RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 GPRIN1Q7Z2K8 1008 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 ANKS1BQ7Z6G8 1248 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 GLRX5Q86SX6 157 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 GALNT15Q8N3T1 639 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 CADM4Q8NFZ8 388 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 DNASE2BQ8WZ79 361 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 NUP58Q9BVL2 599 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 IMPG2Q9BZV3 1241 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 DNAI2Q9GZS0 605 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 MKRN2Q9H000 416 aaKnown RBP11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 BLZF1Q9H2G9 400 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 CUEDC2Q9H467 287 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 CYLDQ9NQC7 956 aa11.03□□□□□ -0.64
CDC42BPB-207ENST00000560492 ITM2CQ9NQX7 267 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms