RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 TMOD3Q9NYL9 352 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 TAS2R1Q9NYW7 299 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 HSFX1Q9UBD0 423 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNHIT2Q9UHR6 403 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PCDHA12Q9UN75 941 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 PLA2G4CQ9UP65 541 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 HIF3AQ9Y2N7 669 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 TMED5Q9Y3A6 229 aa6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 GREB1LQ9C091 1923 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-209ENST00000560307 SBF2Q86WG5 1849 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 BAZ2BQ9UIF8 2168 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 E9PMD0 336 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SPECC1L-ADORA2AF8WAN1 911 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SMIM22K7EJ46 135 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 IPO5O00410 1097 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 DNALI1O14645 258 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ATP2A1O14983 1001 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 DENRO43583 198 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 PSTPIP1O43586 416 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 TBCAO75347 108 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 E2F6O75461 281 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CAMTA2O94983 1202 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 FTLP02792 175 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 C8AP07357 584 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 VIL1P09327 827 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 DHRS4L1P0CG22 281 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 MYBL1P10243 752 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CYP19A1P11511 503 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 IL2RBP14784 551 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 KRT15P19012 456 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 RPA1P27694 616 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SERPINB3P29508 390 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ADSSP30520 456 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 HOXD13P35453 343 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 HSPA13P48723 471 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 AFF1P51825 1210 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 NEK3P51956 506 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ADARP55265 1226 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SNRPFP62306 86 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 MECOMQ03112 1051 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CBX3Q13185 183 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ALCAMQ13740 583 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 MESDQ14696 234 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CBX2Q14781 532 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 MORF4L2Q15014 288 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 PRKD1Q15139 912 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SLC1A5Q15758 541 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SEPT7Q16181 437 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 KBTBD12Q3ZCT8 623 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CCDC92Q53HC0 331 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CFAP157Q5JU67 520 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 TMEM201Q5SNT2 666 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 HP1BP3Q5SSJ5 553 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CDCP2Q5VXM1 449 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 OGFOD2Q6N063 350 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 DHRS4L2Q6PKH6 230 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 LVRNQ6Q4G3 990 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 RINLQ6ZS11 566 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF804AQ7Z570 1209 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 PCGF5Q86SE9 256 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 DHDDSQ86SQ9 333 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SFR1Q86XK3 245 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 C12orf56Q8IXR9 622 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ZBED8Q8IZ13 594 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 AHI1Q8N157 1196 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SYNE4Q8N205 404 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 UBR7Q8N806 425 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 CHAC2Q8WUX2 184 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 JDP2Q8WYK2 163 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 KLHL6Q8WZ60 621 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ACSF2Q96CM8 615 aaPredicted RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 MPP4Q96JB8 637 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 MDFIQ99750 246 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 DHRS4Q9BTZ2 278 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 TSSK1BQ9BXA7 367 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 KLHL4Q9C0H6 718 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 WWP1Q9H0M0 922 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 RBM38Q9H0Z9 239 aaKnown RBP6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 FAM96AQ9H5X1 160 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNF696Q9H7X3 374 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SLCO1B3Q9NPD5 702 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 FAIMQ9NVQ4 179 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 MKS1Q9NXB0 559 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 HEY2Q9UBP5 337 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 TAGLN3Q9UI15 199 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 SHOC2Q9UQ13 582 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 DNM3Q9UQ16 869 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 PTPN22Q9Y2R2 807 aa6.2□□□□□ -1.42
SNRPA1-209ENST00000560307 ZNFX1Q9P2E3 1918 aaKnown RBP6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 GSTTP1A0A1W2PQM5 241 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 CAPN14A8MX76 684 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 F5H6K3 240 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 FCHO1O14526 889 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 ALOX15BO15296 676 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 TGFB1I1O43294 461 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 HNRNPRO43390 633 aaKnown RBP6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 ADCY3O60266 1144 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 CCNT2O60583 730 aaKnown RBP6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 OPHN1O60890 802 aa6.19□□□□□ -1.42
SNRPA1-209ENST00000560307 RNASEH1O60930 286 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms