RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 IGLV3-27P01718 113 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 CISD3P0C7P0 127 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 LCP1P13796 627 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 CNR2P34972 360 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 CHKAP35790 457 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 GRIA2P42262 883 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 RGS7P49802 495 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 PTK2Q05397 1052 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 KRT31Q15323 416 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 HSF5Q4G112 596 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-213ENST00000560175 APTXQ7Z2E3 356 aaKnown RBP13.82□□□□□ -0.2
SMAD3-213ENST00000560175 MIB1Q86YT6 1006 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 SCUBE3Q8IX30 993 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 AZIN2Q96A70 460 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 PLD4Q96BZ4 506 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
SMAD3-213ENST00000560175 RASAL2Q9UJF2 1139 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 AGO1Q9UL18 857 aaKnown RBP13.82□□□□□ -0.2
SMAD3-213ENST00000560175 STRIP2Q9ULQ0 834 aa13.82□□□□□ -0.2
SMAD3-213ENST00000560175 SPAG17Q6Q759 2223 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 ANTXRLA6NF34 631 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 PAPSS1O43252 624 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 SART1O43290 800 aaKnown RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 THAP12O43422 761 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 LATS1O95835 1130 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 LTFP02788 710 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 APODP05090 189 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 UCHL3P15374 230 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 HOXC13P31276 330 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 CDH5P33151 784 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 BPIFB4P59827 614 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 MYL5Q02045 173 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 RING1Q06587 406 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 DMWDQ09019 674 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 EIF4EBP2Q13542 120 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 DRAP1Q14919 205 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 PREPLQ4J6C6 727 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 FYB2Q5VWT5 728 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 WDR5BQ86VZ2 330 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 LONP2Q86WA8 852 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 SFTPA1Q8IWL2 248 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 RPLP0P6Q8NHW5 317 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 CLEC4CQ8WTT0 213 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 EDEM1Q92611 657 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 BPIFA3Q9BQP9 254 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 STK33Q9BYT3 514 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 IRX2Q9BZI1 471 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-213ENST00000560175 DEC1Q9P2X7 70 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 EBF1Q9UH73 591 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 HCN2Q9UL51 889 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 DAAM1Q9Y4D1 1078 aa13.81□□□□□ -0.2
SMAD3-213ENST00000560175 SLC12A8A0AV02 714 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 HRO43593 1189 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 TYRP14679 529 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 CORO1AP31146 461 aaKnown RBP13.8□□□□□ -0.2
SMAD3-213ENST00000560175 TYRO3Q06418 890 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 NNTQ13423 1086 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 RNF43Q68DV7 783 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 SLC47A2Q86VL8 602 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 TERB1Q8NA31 727 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 IL17RCQ8NAC3 791 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 RNF139Q8WU17 664 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 DDX1Q92499 740 aaKnown RBP13.8□□□□□ -0.2
SMAD3-213ENST00000560175 ACDQ96AP0 544 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 XPO6Q96QU8 1125 aaKnown RBP13.8□□□□□ -0.2
SMAD3-213ENST00000560175 FUCA2Q9BTY2 467 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 BBS2Q9BXC9 721 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 VPS16Q9H269 839 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 GANQ9H2C0 597 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 ARHGEF4Q9NR80 690 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 TAB2Q9NYJ8 693 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 SFMBT1Q9UHJ3 866 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 MMP17Q9ULZ9 603 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 SIK3Q9Y2K2 1263 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 SLC27A6Q9Y2P4 619 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 FHOD1Q9Y613 1164 aa13.8□□□□□ -0.2
SMAD3-213ENST00000560175 E5RJQ4 531 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 PIK3R2O00459 728 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 TRIM24O15164 1050 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 IGLV3-25P01717 112 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 GLI1P08151 1106 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 FNTBP49356 437 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 COPB1P53618 953 aaKnown RBP13.79□□□□□ -0.2
SMAD3-213ENST00000560175 ZNF445P59923 1031 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 PDCLQ13371 301 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 DMC1Q14565 340 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 ANO4Q32M45 955 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 DENND1CQ8IV53 801 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 NAT16Q8N8M0 369 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 SLC39A13Q96H72 371 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 ERGIC2Q96RQ1 377 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 POLR3BQ9NW08 1133 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-213ENST00000560175 ASNSD1Q9NWL6 643 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 SLC8A2Q9UPR5 921 aa13.79□□□□□ -0.2
SMAD3-213ENST00000560175 NEDD8-MDP1E9PL57 170 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 HMBSP08397 361 aa13.78□□□□□ -0.2
SMAD3-213ENST00000560175 PNMA6AP0CW24 399 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms