RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PRCCQ92733 491 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 IGSF8Q969P0 613 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 PCED1AQ9H1Q7 454 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 C6orf106Q9H6K1 298 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
RABGGTA-213ENST00000560127 FLNCQ14315 2725 aa13.52□□□□□ -0.24
RABGGTA-213ENST00000560127 A8MXQ7 604 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 NPC1O15118 1278 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 RRP8O43159 456 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 PRPF6O94906 941 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 JUPP14923 745 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 GAP43P17677 238 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 LONP1P36776 959 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 GRIA4P48058 902 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 MFAP3P55082 362 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 IL9RQ01113 521 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 SURF1Q15526 300 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 C6orf118Q5T5N4 469 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 USP49Q70CQ1 688 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 FAM35AQ86V20 835 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 WDR49Q8IV35 697 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 ZMIZ2Q8NF64 920 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 ENGASEQ8NFI3 743 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 SNIP1Q8TAD8 396 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 TM9SF3Q9HD45 589 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 OSGEPQ9NPF4 335 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 OLFML3Q9NRN5 406 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 COMMD8Q9NX08 183 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 SLC27A6Q9Y2P4 619 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 PCDHGA1Q9Y5H4 931 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 TDRD6O60522 2096 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 AHCTF1Q8WYP5 2266 aa13.52□□□□□ -0.25
RABGGTA-213ENST00000560127 ZNF233A6NK53 670 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 PAPSS1O43252 624 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 SYNCRIPO60506 623 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 ACADMP11310 421 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 PRKCHP24723 683 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 ACSL1P33121 698 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 CTSKP43235 329 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 CDH8P55286 799 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 RTP5Q14D33 572 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 TEAD4Q15561 434 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 WDR72Q3MJ13 1102 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 Q6ZNB5 142 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 RBBP8NLQ8NC74 664 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 DMAP1Q9NPF5 467 aaPredicted RBP13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 CYLDQ9NQC7 956 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 OSER1Q9NX31 292 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 LSM7Q9UK45 103 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 AK5Q9Y6K8 562 aa13.51□□□□□ -0.25
RABGGTA-213ENST00000560127 TLN1Q9Y490 2541 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 ATP8B3O60423 1300 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 CBX4O00257 560 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 KIAA0391O15091 583 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 MDM4O15151 490 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 BEST1O76090 585 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 PENKP01210 267 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 HNF1BP35680 557 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 TNNC1P63316 161 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 TARDBPQ13148 414 aaKnown RBP eCLIP13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 ORC1Q13415 861 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 ZNF234Q14588 700 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 FYB2Q5VWT5 728 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 BAP1Q92560 729 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 SMARCD1Q96GM5 515 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 EPSTI1Q96J88 318 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 SMOQ99835 787 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 MED10Q9BTT4 135 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 NRSN2Q9GZP1 204 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 TLR8Q9NR97 1041 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 STK17AQ9UEE5 414 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 DNMT3LQ9UJW3 386 aa13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 UBR5O95071 2799 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-213ENST00000560127 FRMD3A2A2Y4 597 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 CAPN8A6NHC0 703 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 ENC1O14682 589 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 AP1G2O75843 785 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 ATP5C1P36542 298 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 TLE3Q04726 772 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 GOLGA8FQ08AF8 430 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 GOLGA8DPQ0D2H9 430 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 DNAJC3Q13217 504 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 ALCAMQ13740 583 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 INAVAQ3KP66 663 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 FUKQ8N0W3 1084 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 OR2T3Q8NH03 318 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 UCMAQ8WVF2 138 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 SORCS1Q8WY21 1168 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 FGF11Q92914 225 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 BIRC7Q96CA5 298 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 PIWIL1Q96J94 861 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 ORAI3Q9BRQ5 295 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 XYLT2Q9H1B5 865 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 FBXO44Q9H4M3 255 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 SMYD3Q9H7B4 428 aa13.49□□□□□ -0.25
RABGGTA-213ENST00000560127 KRT82Q9NSB4 513 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms