RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 JOSD2Q8TAC2 188 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 SLITRK1Q96PX8 696 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 APOL5Q9BWW9 433 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 ADAM7Q9H2U9 754 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 DENND4CQ5VZ89 1909 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 ANAPC1Q9H1A4 1944 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.26■□□□□ 0.35
TPM1-219ENST00000559397 SART1O43290 800 aaKnown RBP17.26■□□□□ 0.35
TPM1-219ENST00000559397 GLI1P08151 1106 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 CCR2P41597 374 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 NTHL1P78549 312 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 FAM102AQ5T9C2 384 aaPredicted RBP17.26■□□□□ 0.35
TPM1-219ENST00000559397 LRRC38Q5VT99 294 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 SLC26A9Q7LBE3 791 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 RHOT1Q8IXI2 618 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 LEMD2Q8NC56 503 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 PDZD8Q8NEN9 1154 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 RUBCNQ92622 972 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 LRRC1Q9BTT6 524 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 PIDD1Q9HB75 910 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 ASNSD1Q9NWL6 643 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 OSER1Q9NX31 292 aa17.26■□□□□ 0.35
TPM1-219ENST00000559397 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.26■□□□□ 0.35
TPM1-219ENST00000559397 PRUNE2Q8WUY3 3088 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 A0A1W2PQH9 124 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 ZNF840PA6NDX5 716 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 KRIT1O00522 736 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 MOSPD3O75425 235 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 FYNP06241 537 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 GABRR2P28476 465 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 PPP3CCP48454 512 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 YWHAGP61981 247 aaKnown RBP eCLIP17.25■□□□□ 0.35
TPM1-219ENST00000559397 BRD3Q15059 726 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 LONRF2Q1L5Z9 754 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 SLC5A9Q2M3M2 681 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 EFHC1Q5JVL4 640 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 PRSS36Q5K4E3 855 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 BSPRYQ5W0U4 402 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 AADACL2Q6P093 401 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 PDZD4Q76G19 769 aaPredicted RBP17.25■□□□□ 0.35
TPM1-219ENST00000559397 KATNAL2Q8IYT4 538 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 TLR8Q9NR97 1041 aaKnown RBP17.25■□□□□ 0.35
TPM1-219ENST00000559397 METTL5Q9NRN9 209 aaKnown RBP17.25■□□□□ 0.35
TPM1-219ENST00000559397 CDH22Q9UJ99 828 aa17.25■□□□□ 0.35
TPM1-219ENST00000559397 BRWD1Q9NSI6 2320 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 CCDC151A5D8V7 595 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 LTFP02788 710 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 MYL4P12829 197 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 PSEN1P49768 467 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 CLCN6P51797 869 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 PABPC1LQ4VXU2 614 aaKnown RBP17.24■□□□□ 0.35
TPM1-219ENST00000559397 SEL1L2Q5TEA6 688 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 DAB2IPQ5VWQ8 1189 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 CC2D1AQ6P1N0 951 aaPredicted RBP17.24■□□□□ 0.35
TPM1-219ENST00000559397 ARHGAP18Q8N392 663 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 SHKBP1Q8TBC3 707 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 PPM1EQ8WY54 764 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 TCEAL4Q96EI5 215 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 AP1M1Q9BXS5 423 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 ARGLU1Q9NWB6 273 aaPredicted RBP17.24■□□□□ 0.35
TPM1-219ENST00000559397 CLIC5Q9NZA1 410 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 TRPM5Q9NZQ8 1165 aa17.24■□□□□ 0.35
TPM1-219ENST00000559397 C5orf42Q9H799 3197 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 HSF2BPO75031 334 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 GRAP2O75791 330 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 FGF19O95750 216 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 CDC25CP30307 473 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 VSNL1P62760 191 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 YWHAZP63104 245 aaKnown RBP17.23■□□□□ 0.35
TPM1-219ENST00000559397 ACAP1Q15027 740 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 BEND5Q7L4P6 421 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 ARCQ7LC44 396 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 SLC13A5Q86YT5 568 aaPredicted RBP17.23■□□□□ 0.35
TPM1-219ENST00000559397 SMRP1Q8NCR6 262 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 FAM149B1Q96BN6 582 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 SLC2A13Q96QE2 648 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 KRT12Q99456 494 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 UBE2ZQ9H832 354 aaPredicted RBP17.23■□□□□ 0.35
TPM1-219ENST00000559397 POPDC2Q9HBU9 364 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 USTQ9Y2C2 406 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 NR2E1Q9Y466 385 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 A0A1W2PRU2 124 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 C2CD4BA6NLJ0 364 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 RARGP13631 454 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 GJA1P17302 382 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 PSMA2P25787 234 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 PPP2R5EQ16537 467 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 CES5AQ6NT32 575 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 TRNP1Q6NT89 227 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 C8orf74Q6P047 294 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 ZNF276Q8N554 614 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 ARFGAP1Q8N6T3 406 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 EXD1Q8NHP7 514 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 HNRNPLLQ8WVV9 542 aaKnown RBP17.23■□□□□ 0.35
TPM1-219ENST00000559397 ATXN3LQ9H3M9 355 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 WDR6Q9NNW5 1121 aaKnown RBP17.23■□□□□ 0.35
TPM1-219ENST00000559397 ABCC13Q9NSE7 274 aa17.23■□□□□ 0.35
TPM1-219ENST00000559397 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.23■□□□□ 0.353e-7■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms