RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 C16orf72Q14CZ0 275 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 ACSBG2Q5FVE4 666 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 LUZP2Q86TE4 346 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 UNC45BQ8IWX7 931 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 ZNF398Q8TD17 642 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 RXFP2Q8WXD0 754 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 CNDP1Q96KN2 507 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 ZDHHC15Q96MV8 337 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 SPATA33Q96N06 139 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 WRNIP1Q96S55 665 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 CDRT15Q96T59 188 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 TMEM165Q9HC07 324 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 EML4Q9HC35 981 aaKnown RBP7.33□□□□□ -1.24
USP3-210ENST00000559192 IARS2Q9NSE4 1012 aaKnown RBP7.33□□□□□ -1.24
USP3-210ENST00000559192 DKK3Q9UBP4 350 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 NOCTQ9UK39 431 aaKnown RBP7.33□□□□□ -1.24
USP3-210ENST00000559192 RUVBL2Q9Y230 463 aaKnown RBP7.33□□□□□ -1.24
USP3-210ENST00000559192 RWDD3Q9Y3V2 267 aa7.33□□□□□ -1.24
USP3-210ENST00000559192 BAZ2AQ9UIF9 1905 aaKnown RBP7.33□□□□□ -1.24
USP3-210ENST00000559192 TCRBV9S1A1TA0A576 114 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 EEF2KO00418 725 aaKnown RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 ANGPT2O15123 496 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 LZTS3O60299 673 aaPredicted RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 HMGCRP04035 888 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 ITGAVP06756 1048 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 MIPP30301 263 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 HOXD13P35453 343 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 GTF2BQ00403 316 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SLC9A5Q14940 896 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 NUP188Q5SRE5 1749 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 TTC7BQ86TV6 843 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SEPT12Q8IYM1 358 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 LENG1Q96BZ8 264 aaPredicted RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 VPS50Q96JG6 964 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 APOL2Q9BQE5 337 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 GINS4Q9BRT9 223 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 NWD2Q9ULI1 1742 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 TSC22D2O75157 780 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 TNFAIP8O95379 198 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SERPINE1P05121 402 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 MGAT1P26572 445 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 MSX2P35548 267 aaPredicted RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 CDH8P55286 799 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 NOMO3P69849 1222 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 TMEM132DQ14C87 1099 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 GSTA3Q16772 222 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SEL1L3Q68CR1 1132 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 CCDC149Q6ZUS6 474 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SATL1Q86VE3 508 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SLC9A9Q8IVB4 645 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 ATG4CQ96DT6 458 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 FAM167AQ96KS9 214 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 EBF3Q9H4W6 596 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 ACSS3Q9H6R3 686 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 PXMP2Q9NR77 195 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 PKD2L2Q9NZM6 624 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SFMBT1Q9UHJ3 866 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 COMMD3-BMI1R4GMX3 469 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 CICQ96RK0 1608 aaPredicted RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 GAKO14976 1311 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 PARP4Q9UKK3 1724 aaKnown RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 SDR42E2A6NKP2 422 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 M0R3G1 203 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 FOSL2P15408 326 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 ADRA2BP18089 450 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 CAP2P40123 477 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SERPINB8P50452 374 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 TPI1P60174 286 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 PPIDQ08752 370 aaKnown RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 PTK2BQ14289 1009 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 RBBP7Q16576 425 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 CYP1B1Q16678 543 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 DEPDC1Q5TB30 811 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 DENND1BQ6P3S1 775 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.32□□□□□ -1.247e-6■□□□□ 10.8
USP3-210ENST00000559192 CERS5Q8N5B7 392 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 PTPRN2Q92932 1015 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SIK2Q9H0K1 926 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 TCF7L2Q9NQB0 619 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 XPNPEP3Q9NQH7 507 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SPATA31A5Q5VU36 1347 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SPATA31A7Q8IWB4 1347 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 ABLIM1O14639 778 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 MT-CO1P00395 513 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 FESP07332 822 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SNHG28P0DPA3 235 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 TGM2P21980 687 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 CYP2F1P24903 491 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 GNL1P36915 607 aaPredicted RBP7.32□□□□□ -1.24
USP3-210ENST00000559192 RPS6KA3P51812 740 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SLC5A9Q2M3M2 681 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 CNPY1Q3B7I2 92 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 FUT11Q495W5 492 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 EMC10Q5UCC4 262 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 CYP2R1Q6VVX0 501 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 KYQ8NBH2 561 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 IL31RAQ8NI17 732 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 HELQQ8TDG4 1101 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 VPS39Q96JC1 886 aa7.32□□□□□ -1.24
USP3-210ENST00000559192 SERAC1Q96JX3 654 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms