RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 HOXC11O43248 304 aaPredicted RBP12.5□□□□□ -0.41
CASC4-208ENST00000559151 FOXD2O60548 495 aaPredicted RBP12.5□□□□□ -0.41
CASC4-208ENST00000559151 DDIT3P35638 169 aa12.5□□□□□ -0.41
CASC4-208ENST00000559151 TUBP50607 506 aa12.5□□□□□ -0.41
CASC4-208ENST00000559151 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
CASC4-208ENST00000559151 SIM2Q14190 667 aaPredicted RBP12.5□□□□□ -0.41
CASC4-208ENST00000559151 DLGAP5Q15398 846 aa12.5□□□□□ -0.41
CASC4-208ENST00000559151 MAPRE1Q15691 268 aaKnown RBP12.5□□□□□ -0.41
CASC4-208ENST00000559151 ZNF569Q5MCW4 686 aa12.5□□□□□ -0.41
CASC4-208ENST00000559151 ANKRD40Q6AI12 368 aa12.5□□□□□ -0.41
CASC4-208ENST00000559151 RETSATQ6NUM9 610 aa12.5□□□□□ -0.41
CASC4-208ENST00000559151 DERAQ9Y315 318 aa12.5□□□□□ -0.41
CASC4-208ENST00000559151 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
CASC4-208ENST00000559151 MPPED1O15442 326 aa12.49□□□□□ -0.41
CASC4-208ENST00000559151 RHOBTB3O94955 611 aa12.49□□□□□ -0.41
CASC4-208ENST00000559151 ADRA1DP25100 572 aa12.49□□□□□ -0.41
CASC4-208ENST00000559151 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
CASC4-208ENST00000559151 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
CASC4-208ENST00000559151 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
CASC4-208ENST00000559151 TUBA3CQ13748 450 aa12.49□□□□□ -0.41
CASC4-208ENST00000559151 TUBA3EQ6PEY2 450 aa12.49□□□□□ -0.41
CASC4-208ENST00000559151 PPHLN1Q8NEY8 458 aaKnown RBP12.49□□□□□ -0.41
CASC4-208ENST00000559151 PRR11Q96HE9 360 aaPredicted RBP12.49□□□□□ -0.41
CASC4-208ENST00000559151 SAP30LQ9HAJ7 183 aa12.49□□□□□ -0.41
CASC4-208ENST00000559151 UBE2J1Q9Y385 318 aaPredicted RBP12.49□□□□□ -0.41
CASC4-208ENST00000559151 PCDHB2Q9Y5E7 798 aa12.49□□□□□ -0.41
CASC4-208ENST00000559151 CES2O00748 559 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 TFRCP02786 760 aaKnown RBP12.48□□□□□ -0.41
CASC4-208ENST00000559151 PEPDP12955 493 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 LIFRP42702 1097 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 GEMIN4P57678 1058 aaKnown RBP12.48□□□□□ -0.41
CASC4-208ENST00000559151 TRPC3Q13507 836 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 AAK1Q2M2I8 961 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 LY6G5CQ5SRR4 150 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 KIAA0895LQ68EN5 471 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 C16orf89Q6UX73 402 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 Q6ZWC4 215 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 NPIPB3Q92617 1050 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 HTRA1Q92743 480 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 KCNK9Q9NPC2 374 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 UBN1Q9NPG3 1134 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 TMEM160Q9NX00 188 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 SLC13A4Q9UKG4 626 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 RAB21Q9UL25 225 aa12.48□□□□□ -0.41
CASC4-208ENST00000559151 REXO2Q9Y3B8 237 aaKnown RBP12.48□□□□□ -0.41
CASC4-208ENST00000559151 XBP1P17861 261 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 ITPKBP27987 946 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 PTCHD4Q6ZW05 846 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 MAATS1Q7Z4T9 603 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 SLC44A3Q8N4M1 653 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 SIRT6Q8N6T7 355 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 SKA1Q96BD8 255 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 ARHGEF3Q9NR81 526 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 RXFP3Q9NSD7 469 aa12.47□□□□□ -0.41
CASC4-208ENST00000559151 A6NLC8 198 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 STX16-NPEPL1H3BU86 382 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 STX16O14662 325 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 CHRNDQ07001 517 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 Q6ZNX1 250 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 RINLQ6ZS11 566 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 ZNF503Q96F45 646 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 SLC26A6Q9BXS9 759 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 GOLGA2P5Q9HBQ8 144 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 NOD2Q9HC29 1040 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 MGAT4CQ9UBM8 478 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 TRPC5Q9UL62 973 aaPredicted RBP12.46□□□□□ -0.41
CASC4-208ENST00000559151 DNAJC16Q9Y2G8 782 aa12.46□□□□□ -0.41
CASC4-208ENST00000559151 CCDC187A0A096LP49 1063 aa12.45□□□□□ -0.42
CASC4-208ENST00000559151 HEXIM1O94992 359 aaKnown RBP12.45□□□□□ -0.42
CASC4-208ENST00000559151 CNPP09543 421 aaKnown RBP12.45□□□□□ -0.42
CASC4-208ENST00000559151 ENGP17813 658 aa12.45□□□□□ -0.42
CASC4-208ENST00000559151 PSG6Q00889 435 aa12.45□□□□□ -0.42
CASC4-208ENST00000559151 EFEMP1Q12805 493 aa12.45□□□□□ -0.42
CASC4-208ENST00000559151 NBPF8Q3BBV2 869 aa12.45□□□□□ -0.42
CASC4-208ENST00000559151 FNDC7Q5VTL7 733 aa12.45□□□□□ -0.42
CASC4-208ENST00000559151 BBS12Q6ZW61 710 aa12.45□□□□□ -0.42
CASC4-208ENST00000559151 PARS2Q7L3T8 475 aaKnown RBP12.45□□□□□ -0.42
CASC4-208ENST00000559151 ZNF551Q7Z340 670 aaPredicted RBP12.45□□□□□ -0.42
CASC4-208ENST00000559151 RP9Q8TA86 221 aaKnown RBP12.45□□□□□ -0.42
CASC4-208ENST00000559151 DLDP09622 509 aaKnown RBP12.44□□□□□ -0.42
CASC4-208ENST00000559151 MCM2P49736 904 aa12.44□□□□□ -0.42
CASC4-208ENST00000559151 RPL15P61313 204 aaKnown RBP12.44□□□□□ -0.42
CASC4-208ENST00000559151 MPP1Q00013 466 aa12.44□□□□□ -0.42
CASC4-208ENST00000559151 DNASE1L3Q13609 305 aa12.44□□□□□ -0.42
CASC4-208ENST00000559151 KAZNQ674X7 775 aa12.44□□□□□ -0.42
CASC4-208ENST00000559151 FAR2Q96K12 515 aa12.44□□□□□ -0.42
CASC4-208ENST00000559151 DLL3Q9NYJ7 618 aa12.44□□□□□ -0.42
CASC4-208ENST00000559151 AMFRQ9UKV5 643 aa12.44□□□□□ -0.42
CASC4-208ENST00000559151 TMPRSS11DO60235 418 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 URI1O94763 535 aaPredicted RBP12.43□□□□□ -0.42
CASC4-208ENST00000559151 MMP8P22894 467 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 CYP2C18P33260 490 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 DIO1P49895 249 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 FOXE3Q13461 319 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 FAM187BQ17R55 369 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 TBRG1Q3YBR2 411 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 ZNF484Q5JVG2 852 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms