RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 LINC01465Q8N7H1 131 aa13.9□□□□□ -0.18
CPNE6-210ENST00000558995 TEKT4Q8WW24 435 aa13.9□□□□□ -0.18
CPNE6-210ENST00000558995 LENG1Q96BZ8 264 aaPredicted RBP13.9□□□□□ -0.18
CPNE6-210ENST00000558995 PIWIL1Q96J94 861 aaKnown RBP13.9□□□□□ -0.18
CPNE6-210ENST00000558995 DNAAF2Q9NVR5 837 aaKnown RBP13.9□□□□□ -0.18
CPNE6-210ENST00000558995 DPP3Q9NY33 737 aa13.9□□□□□ -0.18
CPNE6-210ENST00000558995 APOL1O14791 398 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 AVILO75366 819 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 PFKMP08237 780 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 ARF4P18085 180 aaPredicted RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 PTPN4P29074 926 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 BCAR1P56945 870 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 SFSWAPQ12872 951 aaKnown RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 OVGP1Q12889 678 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 CTC1Q2NKJ3 1217 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 DUSP28Q4G0W2 176 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 LRRC23Q53EV4 343 aaPredicted RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 FAM13CQ8NE31 585 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 USP6NLQ92738 828 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 TUBB6Q9BUF5 446 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 TLE6Q9H808 572 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 ALG13Q9NP73 1137 aaKnown RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 SPATA7Q9P0W8 599 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 RPL26L1Q9UNX3 145 aaKnown RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 BCLAF3A2AJT9 711 aaKnown RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 GRAP2O75791 330 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 FAM155BO75949 473 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 MMP3P08254 477 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 YWHAZP63104 245 aaKnown RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 MARCH8Q5T0T0 291 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 TTC39BQ5VTQ0 682 aaPredicted RBP13.89□□□□□ -0.19
CPNE6-210ENST00000558995 SCYL2Q6P3W7 929 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 LRRC6Q86X45 466 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 PQLC3Q8N755 202 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 OR6J1Q8NGC5 347 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 TBCBQ99426 244 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
CPNE6-210ENST00000558995 TRDMT1O14717 391 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 C1QAP02745 245 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 MAGEA6P43360 314 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 PRKD1Q15139 912 aaPredicted RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 GOLGA7BQ2TAP0 167 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 WASHC2DQ5SRD0 308 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 SYCP2LQ5T4T6 812 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 SLC9A4Q6AI14 798 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 PRPF39Q86UA1 669 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 NT5DC4Q86YG4 428 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 CFAP36Q96G28 342 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ACAP3Q96P50 834 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 FAM111AQ96PZ2 611 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 KLC2Q9H0B6 622 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ABHD16BQ9H3Z7 469 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 RNPEPL1Q9HAU8 725 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 PCDH18Q9HCL0 1135 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ZNF180Q9UJW8 692 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 MTO1Q9Y2Z2 717 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 TTLL3Q9Y4R7 772 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 HEY1Q9Y5J3 304 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ANK1P16157 1881 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 A0A0G2JND7 137 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 A0A1B0GVG6 124 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ZNF189O75820 626 aaPredicted RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ZBED1O96006 694 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 IL1BP01584 269 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 RBL1P28749 1068 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 EPHB2P29323 1055 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ARFIP2P53365 341 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 HUNKP57058 714 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ROR2Q01974 943 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 GRIK4Q16099 956 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 C12orf29Q8N999 325 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 PCDH19Q8TAB3 1148 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 NGRNQ9NPE2 291 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 PAPOLBQ9NRJ5 636 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 SETD4Q9NVD3 440 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 CNTN3Q9P232 1028 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 HEY2Q9UBP5 337 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ZC3H7BQ9UGR2 993 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 DNAJC6O75061 913 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 KRT37O76014 449 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 SNRPAP09012 282 aaKnown RBP13.88□□□□□ -0.19
CPNE6-210ENST00000558995 SDC4P31431 198 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 RGS7P49802 495 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 LGSNQ5TDP6 509 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 OLFML1Q6UWY5 402 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 C4orf22Q6V702 233 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 PPM1NQ8N819 430 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 FAM172AQ8WUF8 416 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 TTC17Q96AE7 1141 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ANKRD27Q96NW4 1050 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 POPDC2Q9HBU9 364 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 ETNK2Q9NVF9 386 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 GPATCH2LQ9NWQ4 482 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 NUMBLQ9Y6R0 609 aa13.88□□□□□ -0.19
CPNE6-210ENST00000558995 DOCK3Q8IZD9 2030 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 E7ENQ6 273 aa13.87□□□□□ -0.19
CPNE6-210ENST00000558995 COPEO14579 308 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms