RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SYNJ2BP-COX16A0A087WUM0 186 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 CCDC66A2RUB6 948 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 DDX3YO15523 660 aaKnown RBP18.83■□□□□ 0.6
CLPX-203ENST00000558958 IRAK2O43187 625 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 IL1R2P27930 398 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 GBP1P32455 592 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 CCR2P41597 374 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 PEX5P50542 639 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 EFEMP1Q12805 493 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 HADHQ16836 314 aaKnown RBP18.83■□□□□ 0.6
CLPX-203ENST00000558958 PAPD7Q5XG87 772 aaKnown RBP18.83■□□□□ 0.6
CLPX-203ENST00000558958 TMC5Q6UXY8 1006 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 PDZD4Q76G19 769 aaPredicted RBP18.83■□□□□ 0.6
CLPX-203ENST00000558958 POLNQ7Z5Q5 900 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 SMG7Q92540 1137 aaKnown RBP18.83■□□□□ 0.6
CLPX-203ENST00000558958 ZNF592Q92610 1267 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 FAM161BQ96MY7 647 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 GCNAQ96QF7 691 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 PEBP4Q96S96 227 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.83■□□□□ 0.6
CLPX-203ENST00000558958 MARCH2Q9P0N8 246 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 COX16Q9P0S2 106 aa18.83■□□□□ 0.6
CLPX-203ENST00000558958 A0A1W2PRU2 124 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 C2orf78A6NCI8 922 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 NRG2O14511 850 aaPredicted RBP18.82■□□□□ 0.6
CLPX-203ENST00000558958 MDM4O15151 490 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 MSI1O43347 362 aaKnown RBP18.82■□□□□ 0.6
CLPX-203ENST00000558958 COCHO43405 550 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 PRPSAP2O60256 369 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 ATP5C1P36542 298 aaKnown RBP18.82■□□□□ 0.6
CLPX-203ENST00000558958 MARCKSL1P49006 195 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 CXCR3P49682 368 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 NNTQ13423 1086 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 TXNRD3NBQ6F5E7 133 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 ANKRD54Q6NXT1 300 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 SCYL2Q6P3W7 929 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 CYP4V2Q6ZWL3 525 aaPredicted RBP18.82■□□□□ 0.6
CLPX-203ENST00000558958 GRASPQ7Z6J2 395 aaPredicted RBP18.82■□□□□ 0.6
CLPX-203ENST00000558958 UBL4BQ8N7F7 174 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 KIF18AQ8NI77 898 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 SHKBP1Q8TBC3 707 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 MRPS31Q92665 395 aaKnown RBP18.82■□□□□ 0.6
CLPX-203ENST00000558958 ALG3Q92685 438 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 SERPINB11Q96P15 392 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 ATXN3LQ9H3M9 355 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 PIDD1Q9HB75 910 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 TMEM51Q9NW97 253 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 DNMT3LQ9UJW3 386 aa18.82■□□□□ 0.6
CLPX-203ENST00000558958 MOSPD3O75425 235 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 KRT7P08729 469 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 IGFBP4P22692 258 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 DNA2P51530 1060 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 NTHL1P78549 312 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 CYP4F8P98187 520 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 CTC1Q2NKJ3 1217 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 BOLA3Q53S33 107 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 PRSS36Q5K4E3 855 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 RARS2Q5T160 578 aaKnown RBP18.81■□□□□ 0.6
CLPX-203ENST00000558958 TXNDC8Q6A555 127 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 SYCE2Q6PIF2 218 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 SND1Q7KZF4 910 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLPX-203ENST00000558958 FAM131BQ86XD5 332 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 TCEAL4Q96EI5 215 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 GAS2L1Q99501 681 aaPredicted RBP18.81■□□□□ 0.6
CLPX-203ENST00000558958 RNF38Q9H0F5 515 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 ZWILCHQ9H900 591 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 RASAL2Q9UJF2 1139 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 SNX12Q9UMY4 172 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 TLR6Q9Y2C9 796 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.81■□□□□ 0.6
CLPX-203ENST00000558958 SZT2Q5T011 3432 aa18.81■□□□□ 0.6
CLPX-203ENST00000558958 DOCK6Q96HP0 2047 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 ANAPC1Q9H1A4 1944 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 OLFM2O95897 454 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 GJA1P17302 382 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 HOXB8P17481 243 aaPredicted RBP18.8■□□□□ 0.6
CLPX-203ENST00000558958 GJC1P36383 396 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 AMPD2Q01433 879 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 COL19A1Q14993 1142 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 TRIP4Q15650 581 aaPredicted RBP18.8■□□□□ 0.6
CLPX-203ENST00000558958 SLC5A9Q2M3M2 681 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 ATP13A4Q4VNC1 1196 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 GPR153Q6NV75 609 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 MIB1Q86YT6 1006 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 KATNAL2Q8IYT4 538 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 CCDC185Q8N715 623 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 SLC39A13Q96H72 371 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 NACA2Q9H009 215 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 TRPC7Q9HCX4 862 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 CLEC1BQ9P126 229 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 NOTCH4Q99466 2003 aa18.8■□□□□ 0.6
CLPX-203ENST00000558958 ZNF197O14709 1029 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 RARAP10276 462 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 PRLRP16471 622 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 PFKLP17858 780 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 RWDD2BP57060 319 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 PPP2R5DQ14738 602 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 SMTNL2Q2TAL5 461 aa18.79■□□□□ 0.6
CLPX-203ENST00000558958 ZC3H12AQ5D1E8 599 aaKnown RBP18.79■□□□□ 0.6
CLPX-203ENST00000558958 KCNT1Q5JUK3 1230 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms