RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 STILQ15468 1287 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 RAB6CQ53S08 254 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 TAF3Q5VWG9 929 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 FYB2Q5VWT5 728 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 NADSYN1Q6IA69 706 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 C1orf228Q6PIY5 440 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 TOGARAM2Q6ZUX3 1019 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 FAM183BPQ6ZVS7 135 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 FMNL3Q8IVF7 1028 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 NAT16Q8N8M0 369 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 SLC39A13Q96H72 371 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 TTYH3Q9C0H2 523 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 RAB6CQ9H0N0 254 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 SPHK2Q9NRA0 654 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 MARCH2Q9P0N8 246 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 FBXO10Q9UK96 956 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 GPR179Q6PRD1 2367 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 CFAP54Q96N23 3096 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 A0A1B0GTH6 734 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 GOLGA6L7A0A1B0GV03 622 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 HOXC11O43248 304 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 GFPT2O94808 682 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 LTFP02788 710 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 SLC6A4P31645 630 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 NBL1P41271 181 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 KIR2DL1P43626 348 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 PSEN1P49768 467 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 NFKBIBQ15653 356 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 FAM133BQ5BKY9 247 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 OLFML1Q6UWY5 402 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 DENND1CQ8IV53 801 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 ADAM32Q8TC27 787 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 IRGQQ8WZA9 623 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 CD101Q93033 1021 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 FCRL2Q96LA5 508 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 P2RY13Q9BPV8 354 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 CD248Q9HCU0 757 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 SPATA6Q9NWH7 488 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 PLK2Q9NYY3 685 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 MARK1Q9P0L2 795 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 STOML2Q9UJZ1 356 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 R4GN57 208 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 WDR87Q6ZQQ6 2873 aa13.22□□□□□ -0.29
RABGGTA-207ENST00000558936 AP5Z1O43299 807 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 ADAM23O75077 832 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 RNF40O75150 1001 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 TULP3O75386 442 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 PENKP01210 267 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 CYP1A1P04798 512 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 CORO1AP31146 461 aaKnown RBP13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 NOMO3P69849 1222 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 UBXN1Q04323 297 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 BTBD8Q5XKL5 378 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 RNF43Q68DV7 783 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 TPGS1Q6ZTW0 290 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 ASCL5Q7RTU5 278 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 IRF2BP2Q7Z5L9 587 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 TAC4Q86UU9 113 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 DNAAF5Q86Y56 855 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 CPA6Q8N4T0 437 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 WFDC5Q8TCV5 224 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 PPP1R13BQ96KQ4 1090 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 LMLNQ96KR4 655 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 SLC2A13Q96QE2 648 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 ST7Q9NRC1 585 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 SH3BP1Q9Y3L3 701 aa13.21□□□□□ -0.29
RABGGTA-207ENST00000558936 PROB1E7EW31 1015 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 PES1O00541 588 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 LAMTOR5O43504 91 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 LILRB5O75023 590 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 GRAP2O75791 330 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 GJB6O95452 261 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 NFATC1O95644 943 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 RALAP11233 206 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 ADH5P11766 374 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 UNGP13051 313 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 SOX5P35711 763 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 GABRB2P47870 512 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 MRE11P49959 708 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 PTK2Q05397 1052 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 SRSF5Q13243 272 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 DGKKQ5KSL6 1271 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 BNIPLQ7Z465 357 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 DDX42Q86XP3 938 aaKnown RBP eCLIP13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 SIX6OS1Q8N1H7 587 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 ZBTB44Q8NCP5 570 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 BHMTQ93088 406 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 ACOX2Q99424 681 aa13.2□□□□□ -0.3
RABGGTA-207ENST00000558936 TBC1D14Q9P2M4 693 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms