RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 GOLGA1Q92805 767 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 FAR2Q96K12 515 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 PBKQ96KB5 322 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 SEC62Q99442 399 aaKnown RBP5.02□□□□□ -1.61
CASC4-206ENST00000558847 SNX15Q9NRS6 342 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 SYBUQ9NX95 663 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 FEM1BQ9UK73 627 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 PNMA2Q9UL42 364 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 CNTN6Q9UQ52 1028 aa5.02□□□□□ -1.61
CASC4-206ENST00000558847 CCDC151A5D8V7 595 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 FAM90A18PA6NE21 464 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 FAM90A16PA6NEW6 464 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 FAM90A9PA6NNJ1 464 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 FAM90A5PA8MXJ8 464 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 J3KRW8 73 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 YY2O15391 372 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 MPPED1O15442 326 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 HOXC11O43248 304 aaPredicted RBP5.01□□□□□ -1.61
CASC4-206ENST00000558847 TSPAN3O60637 253 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 CBFA2T3O75081 653 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 PPP6R2O75170 966 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 RHOBTB3O94955 611 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 FAM90A15PP0C7V4 464 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 FAM90A14PP0C7W9 464 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 LMO1P25800 156 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 KLRK1P26718 216 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 GKP32189 559 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 CASP2P42575 452 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 UBE3AQ05086 875 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 SF3A3Q12874 501 aaKnown RBP eCLIP5.01□□□□□ -1.61
CASC4-206ENST00000558847 EIF2B5Q13144 721 aaKnown RBP5.01□□□□□ -1.61
CASC4-206ENST00000558847 SEMA3BQ13214 749 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 CUL4BQ13620 913 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 PTPAQ15257 358 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 SF3B3Q15393 1217 aaKnown RBP5.01□□□□□ -1.61
CASC4-206ENST00000558847 BTBD16Q32M84 506 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 TBC1D25Q3MII6 688 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 TMEM196Q5HYL7 178 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 DGAT2L7PQ6IED9 249 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 WDR53Q7Z5U6 358 aaPredicted RBP5.01□□□□□ -1.61
CASC4-206ENST00000558847 ANKS1BQ7Z6G8 1248 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 SIRT6Q8N6T7 355 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.01□□□□□ -1.61
CASC4-206ENST00000558847 SUPT20HQ8NEM7 779 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 RP9Q8TA86 221 aaKnown RBP5.01□□□□□ -1.61
CASC4-206ENST00000558847 MYCBPAPQ8TBZ2 947 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 HMGB4Q8WW32 186 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 LPIN2Q92539 896 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 FBXL20Q96IG2 436 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 HAPLN3Q96S86 360 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 SENP7Q9BQF6 1050 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 WDR11Q9BZH6 1224 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 VPS16Q9H269 839 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 GABRQQ9UN88 632 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 CRYL1Q9Y2S2 319 aa5.01□□□□□ -1.61
CASC4-206ENST00000558847 PIPSLA2A3N6 862 aa5□□□□□ -1.61
CASC4-206ENST00000558847 SAC3D1A6NKF1 404 aa5□□□□□ -1.61
CASC4-206ENST00000558847 E7EVH7 732 aa5□□□□□ -1.61
CASC4-206ENST00000558847 AGPSO00116 658 aa5□□□□□ -1.61
CASC4-206ENST00000558847 CTIFO43310 598 aaKnown RBP5□□□□□ -1.61
CASC4-206ENST00000558847 RPP40O75818 363 aaKnown RBP5□□□□□ -1.61
CASC4-206ENST00000558847 TJP3O95049 919 aa5□□□□□ -1.61
CASC4-206ENST00000558847 PYGLP06737 847 aa5□□□□□ -1.61
CASC4-206ENST00000558847 EGR2P11161 476 aaPredicted RBP5□□□□□ -1.61
CASC4-206ENST00000558847 ITGAMP11215 1152 aa5□□□□□ -1.61
CASC4-206ENST00000558847 CREB1P16220 341 aa5□□□□□ -1.61
CASC4-206ENST00000558847 ZNF37AP17032 561 aaPredicted RBP5□□□□□ -1.61
CASC4-206ENST00000558847 DRD1P21728 446 aa5□□□□□ -1.61
CASC4-206ENST00000558847 ADRA1DP25100 572 aa5□□□□□ -1.61
CASC4-206ENST00000558847 FOLR3P41439 243 aa5□□□□□ -1.61
CASC4-206ENST00000558847 AVPR1BP47901 424 aa5□□□□□ -1.61
CASC4-206ENST00000558847 PRKAA2P54646 552 aa5□□□□□ -1.61
CASC4-206ENST00000558847 TAP1Q03518 808 aa5□□□□□ -1.61
CASC4-206ENST00000558847 KCNJ12Q14500 433 aa5□□□□□ -1.61
CASC4-206ENST00000558847 SMAD1Q15797 465 aaKnown RBP5□□□□□ -1.61
CASC4-206ENST00000558847 LY6KQ17RY6 165 aa5□□□□□ -1.61
CASC4-206ENST00000558847 SLC4A8Q2Y0W8 1093 aa5□□□□□ -1.61
CASC4-206ENST00000558847 CTXN3Q4LDR2 81 aa5□□□□□ -1.61
CASC4-206ENST00000558847 TREML2Q5T2D2 321 aa5□□□□□ -1.61
CASC4-206ENST00000558847 NAA35Q5VZE5 725 aa5□□□□□ -1.61
CASC4-206ENST00000558847 CCDC144NLQ6NUI1 221 aa5□□□□□ -1.61
CASC4-206ENST00000558847 ZNF551Q7Z340 670 aaPredicted RBP5□□□□□ -1.61
CASC4-206ENST00000558847 MAVSQ7Z434 540 aa5□□□□□ -1.61
CASC4-206ENST00000558847 GPR149Q86SP6 731 aa5□□□□□ -1.61
CASC4-206ENST00000558847 P3H2Q8IVL5 708 aa5□□□□□ -1.61
CASC4-206ENST00000558847 SUGP1Q8IWZ8 645 aaKnown RBP5□□□□□ -1.61
CASC4-206ENST00000558847 C11orf44Q8N8P7 122 aa5□□□□□ -1.61
CASC4-206ENST00000558847 BEND2Q8NDZ0 799 aa5□□□□□ -1.61
CASC4-206ENST00000558847 OR1N1Q8NGS0 311 aa5□□□□□ -1.61
CASC4-206ENST00000558847 GPR150Q8NGU9 434 aa5□□□□□ -1.61
CASC4-206ENST00000558847 XAGE5Q8WWM1 108 aa5□□□□□ -1.61
CASC4-206ENST00000558847 LINC00476Q8WZB0 136 aa5□□□□□ -1.61
CASC4-206ENST00000558847 HERVK_113Q902F9 699 aa5□□□□□ -1.61
CASC4-206ENST00000558847 R3HDM4Q96D70 268 aa5□□□□□ -1.61
CASC4-206ENST00000558847 REXO5Q96IC2 774 aaKnown RBP5□□□□□ -1.61
CASC4-206ENST00000558847 AIFM2Q9BRQ8 373 aa5□□□□□ -1.61
CASC4-206ENST00000558847 CINPQ9BW66 212 aaPredicted RBP5□□□□□ -1.61
CASC4-206ENST00000558847 CCDC134Q9H6E4 229 aa5□□□□□ -1.61
CASC4-206ENST00000558847 RIOX1Q9H6W3 641 aa5□□□□□ -1.61
CASC4-206ENST00000558847 JMJD4Q9H9V9 463 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms