RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 MIIPQ5JXC2 388 aa16■□□□□ 0.15
RPL28-207ENST00000558815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16■□□□□ 0.15
RPL28-207ENST00000558815 PASD1Q8IV76 773 aa16■□□□□ 0.15
RPL28-207ENST00000558815 PHTF2Q8N3S3 785 aa16■□□□□ 0.15
RPL28-207ENST00000558815 TERB1Q8NA31 727 aa16■□□□□ 0.15
RPL28-207ENST00000558815 TXNDC5Q8NBS9 432 aaKnown RBP16■□□□□ 0.15
RPL28-207ENST00000558815 TSTD1Q8NFU3 115 aa16■□□□□ 0.15
RPL28-207ENST00000558815 ZNF606Q8WXB4 792 aa16■□□□□ 0.15
RPL28-207ENST00000558815 FAM149B1Q96BN6 582 aa16■□□□□ 0.15
RPL28-207ENST00000558815 PLD4Q96BZ4 506 aa16■□□□□ 0.15
RPL28-207ENST00000558815 HSFY1Q96LI6 401 aa16■□□□□ 0.15
RPL28-207ENST00000558815 GMEB2Q9UKD1 530 aa16■□□□□ 0.15
RPL28-207ENST00000558815 AGO1Q9UL18 857 aaKnown RBP16■□□□□ 0.15
RPL28-207ENST00000558815 MMP17Q9ULZ9 603 aa16■□□□□ 0.15
RPL28-207ENST00000558815 ZNF510Q9Y2H8 683 aa16■□□□□ 0.15
RPL28-207ENST00000558815 AXIN1O15169 862 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 MBD3O95983 291 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 LTFP02788 710 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 CNR2P34972 360 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 GPD2P43304 727 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 DGKGP49619 791 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 DGKEP52429 567 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 RAPGEF1Q13905 1077 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 PREPLQ4J6C6 727 aaPredicted RBP15.99■□□□□ 0.15
RPL28-207ENST00000558815 TCP11X2Q5H9J9 407 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 ANO7Q6IWH7 933 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 RBM43Q6ZSC3 357 aaKnown RBP15.99■□□□□ 0.15
RPL28-207ENST00000558815 C11orf57Q6ZUT1 292 aaPredicted RBP15.99■□□□□ 0.15
RPL28-207ENST00000558815 TOGARAM2Q6ZUX3 1019 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 NUDT18Q6ZVK8 323 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 SCUBE3Q8IX30 993 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 SCML4Q8N228 414 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 CAMKK1Q8N5S9 505 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 IRGQQ8WZA9 623 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 SHC3Q92529 594 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 LSM14BQ9BX40 385 aaKnown RBP15.99■□□□□ 0.15
RPL28-207ENST00000558815 VPS16Q9H269 839 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 MARK1Q9P0L2 795 aa15.99■□□□□ 0.15
RPL28-207ENST00000558815 HBS1LQ9Y450 684 aaKnown RBP15.99■□□□□ 0.15
RPL28-207ENST00000558815 SGK1O00141 431 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 CACNG3O60359 315 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 TSPAN3O60637 253 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 RPP40O75818 363 aaKnown RBP15.98■□□□□ 0.15
RPL28-207ENST00000558815 FBXO21O94952 628 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 EEF1GP26641 437 aaKnown RBP15.98■□□□□ 0.15
RPL28-207ENST00000558815 HOXA6P31267 233 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 CHKAP35790 457 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 WASP42768 502 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 TNFRSF4P43489 277 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
RPL28-207ENST00000558815 STX1AQ16623 288 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 CT47A1Q5JQC4 288 aaPredicted RBP15.98■□□□□ 0.15
RPL28-207ENST00000558815 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 ZNF513Q8N8E2 541 aaPredicted RBP15.98■□□□□ 0.15
RPL28-207ENST00000558815 IL17RCQ8NAC3 791 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 ENOX1Q8TC92 643 aaKnown RBP15.98■□□□□ 0.15
RPL28-207ENST00000558815 GAB3Q8WWW8 586 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 ERLEC1Q96DZ1 483 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 TPSD1Q9BZJ3 242 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 CYTH4Q9UIA0 394 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 INVSQ9Y283 1065 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 FHOD1Q9Y613 1164 aa15.98■□□□□ 0.15
RPL28-207ENST00000558815 FAM170AA1A519 330 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 E5RJQ4 531 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 CYBBP04839 570 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 NCAM1P13591 858 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 KIR2DL1P43626 348 aaPredicted RBP15.97■□□□□ 0.15
RPL28-207ENST00000558815 ACADSBP45954 432 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 PTK2Q05397 1052 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 KCNMA1Q12791 1236 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 TRIP4Q15650 581 aaPredicted RBP15.97■□□□□ 0.15
RPL28-207ENST00000558815 CRY1Q16526 586 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 EOGTQ5NDL2 527 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 LAIR1Q6GTX8 287 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 MSANTD2Q6P1R3 559 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 TMEM92Q6UXU6 159 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 DDI1Q8WTU0 396 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 P2RY11Q96G91 374 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 ANO10Q9NW15 660 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 TJP2Q9UDY2 1190 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 USP18Q9UMW8 372 aa15.97■□□□□ 0.15
RPL28-207ENST00000558815 CCDC163A0A0D9SF12 145 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 FOXN3O00409 490 aaPredicted RBP15.96■□□□□ 0.15
RPL28-207ENST00000558815 CAPN9O14815 690 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 SART1O43290 800 aaKnown RBP15.96■□□□□ 0.15
RPL28-207ENST00000558815 TPM2P07951 284 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 HNRNPLP14866 589 aaKnown RBP eCLIP15.96■□□□□ 0.15
RPL28-207ENST00000558815 SPEM2Q0P670 501 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 PDCLQ13371 301 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 DRAP1Q14919 205 aaPredicted RBP15.96■□□□□ 0.15
RPL28-207ENST00000558815 KRT31Q15323 416 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 FYB2Q5VWT5 728 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 EGFLAMQ63HQ2 1017 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 KBTBD6Q86V97 674 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 SLC47A2Q86VL8 602 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 PGBD3Q8N328 593 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 FAM160A2Q8N612 972 aaPredicted RBP15.96■□□□□ 0.15
RPL28-207ENST00000558815 ADAM32Q8TC27 787 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 SLC4A5Q9BY07 1137 aa15.96■□□□□ 0.15
RPL28-207ENST00000558815 PDCL3Q9H2J4 239 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms