RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 LRRC4Q9HBW1 653 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 CNGB3Q9NQW8 809 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
SMAD3-207ENST00000558763 ADAM21Q9UKJ8 722 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 ADAM28Q9UKQ2 775 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 PCDHB8Q9UN66 801 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 ZNF148Q9UQR1 794 aa13.48□□□□□ -0.25
SMAD3-207ENST00000558763 RARGP13631 454 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 MYOGP15173 224 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 ADCY8P40145 1251 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 CALCOCO2Q13137 446 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 ANKRD20A8PQ5CZ79 823 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 SIX6OS1Q8N1H7 587 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 FIBCD1Q8N539 461 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 TTC13Q8NBP0 860 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 FAM149B1Q96BN6 582 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 PWWP2AQ96N64 755 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 KCTD15Q96SI1 283 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-207ENST00000558763 COLEC11Q9BWP8 271 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 PCDH9Q9HC56 1237 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 GBF1Q92538 1859 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 MYO16Q9Y6X6 1858 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 PLXNA3P51805 1871 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 GOLGA8KD6RF30 607 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 DNALI1O14645 258 aaPredicted RBP13.47□□□□□ -0.25
SMAD3-207ENST00000558763 OPA1O60313 960 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 FBXO21O94952 628 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 SHBGP04278 402 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 BDNFP23560 247 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 NOS2P35228 1153 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 RGS19P49795 217 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 P3H1Q32P28 736 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 DCAF6Q58WW2 860 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 IZUMO3Q5VZ72 239 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 FAM131BQ86XD5 332 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 ZNF558Q96NG5 402 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 POPDC2Q9HBU9 364 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 TMBIM4Q9HC24 238 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 AP4E1Q9UPM8 1137 aa13.47□□□□□ -0.25
SMAD3-207ENST00000558763 I6L893 689 aaPredicted RBP13.46□□□□□ -0.25
SMAD3-207ENST00000558763 OAZ2O95190 189 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 USP17L7P0C7H9 530 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 LAG3P18627 525 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 SULT1E1P49888 294 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 KRT81Q14533 505 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 CEP85LQ5SZL2 805 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 UNC45BQ8IWX7 931 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 B3GALT6Q96L58 329 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 RUFY1Q96T51 708 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 GPR62Q9BZJ7 368 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 WDR6Q9NNW5 1121 aaKnown RBP13.46□□□□□ -0.25
SMAD3-207ENST00000558763 PIGVQ9NUD9 493 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 FZD10Q9ULW2 581 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 NAALADL1Q9UQQ1 740 aa13.46□□□□□ -0.25
SMAD3-207ENST00000558763 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.26
SMAD3-207ENST00000558763 RIPK2O43353 540 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 NRLP54845 237 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 EIF3EP60228 445 aaKnown RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 CAV1Q03135 178 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 TFDP2Q14188 446 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 SLMAPQ14BN4 828 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 RNASEH2BQ5TBB1 312 aaKnown RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 PM20D1Q6GTS8 502 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 FUT10Q6P4F1 479 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 GSTA5Q7RTV2 222 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 MAP7D3Q8IWC1 876 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 SCML4Q8N228 414 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 PYROXD2Q8N2H3 581 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 SH2D3CQ8N5H7 860 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 CCHCR1Q8TD31 782 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 CDC42EP4Q9H3Q1 356 aaKnown RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 PNPLA8Q9NP80 782 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 DMAP1Q9NPF5 467 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 ANLNQ9NQW6 1124 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 TMPRSS4Q9NRS4 437 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 ANAPC5Q9UJX4 755 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 GOLGA6CA6NDK9 693 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 ARHGEF15O94989 841 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 ZBED1O96006 694 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 LINC00271P0C7V0 271 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 GOLGA6DP0CG33 693 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 RBP3P10745 1247 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 TGM2P21980 687 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 CYP2F1P24903 491 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 YWHAHQ04917 246 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 GPS1Q13098 491 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 SLC29A2Q14542 456 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 PPP6R3Q5H9R7 873 aaPredicted RBP13.45□□□□□ -0.26
SMAD3-207ENST00000558763 FAM171A1Q5VUB5 890 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 SPRED2Q7Z698 418 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 CEP57Q86XR8 500 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 RELL1Q8IUW5 271 aa13.45□□□□□ -0.26
SMAD3-207ENST00000558763 SLC39A11Q8N1S5 342 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms