RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 FKBP3Q00688 224 aaKnown RBP12.11□□□□□ -0.47
CASC4-205ENST00000558735 LMAN2Q12907 356 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 MAP7D1Q3KQU3 841 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
CASC4-205ENST00000558735 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 SPDYCQ5MJ68 293 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 ARHGAP17Q68EM7 881 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 TOGARAM2Q6ZUX3 1019 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 CYP2U1Q7Z449 544 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 ZNF513Q8N8E2 541 aaPredicted RBP12.11□□□□□ -0.47
CASC4-205ENST00000558735 TERB1Q8NA31 727 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 CCDC34Q96HJ3 373 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 ACOX2Q99424 681 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 BBS2Q9BXC9 721 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 CLIC5Q9NZA1 410 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 MARK1Q9P0L2 795 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 WDR35Q9P2L0 1181 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 MBD1Q9UIS9 605 aaPredicted RBP12.11□□□□□ -0.47
CASC4-205ENST00000558735 LSM7Q9UK45 103 aaKnown RBP12.11□□□□□ -0.47
CASC4-205ENST00000558735 FBXO10Q9UK96 956 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 LHX6Q9UPM6 363 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
CASC4-205ENST00000558735 KIAA1549LQ6ZVL6 1849 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 A0A1W2PQF6 199 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 TCRBV21S2A2A0A5A6 115 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 PATE3B3GLJ2 98 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 NEDD8-MDP1E9PL57 170 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 TULP2O00295 520 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 CACNG3O60359 315 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 RALAP11233 206 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 NTSR1P30989 418 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 WASP42768 502 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 DHPSP49366 369 aaPredicted RBP12.1□□□□□ -0.47
CASC4-205ENST00000558735 GOLGA8FQ08AF8 430 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 GOLGA8DPQ0D2H9 430 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 SEMA3BQ13214 749 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 C10orf76Q5T2E6 689 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 TCERG1LQ5VWI1 586 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 PM20D1Q6GTS8 502 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 ISM2Q6H9L7 571 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 GRAMD4Q6IC98 578 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 HMGB4Q8WW32 186 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 NDRG1Q92597 394 aaKnown RBP12.1□□□□□ -0.47
CASC4-205ENST00000558735 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
CASC4-205ENST00000558735 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 SLC32A1Q9H598 525 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 CD248Q9HCU0 757 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 DNAJC17Q9NVM6 304 aaKnown RBP12.1□□□□□ -0.47
CASC4-205ENST00000558735 PLK2Q9NYY3 685 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 NUP205Q92621 2012 aa12.1□□□□□ -0.47
CASC4-205ENST00000558735 SMG1Q96Q15 3661 aaKnown RBP12.09□□□□□ -0.47
CASC4-205ENST00000558735 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 WASH3PC4AMC7 463 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 H0Y626 953 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 SLC16A3O15427 465 aaKnown RBP12.09□□□□□ -0.47
CASC4-205ENST00000558735 MAP3K13O43283 966 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 SMC2O95347 1197 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 TRIM16O95361 564 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
CASC4-205ENST00000558735 GABRG2P18507 467 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 HOXD12P35452 270 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 DPP6P42658 865 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 NUCB2P80303 420 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 COG7P83436 770 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 EFEMP1Q12805 493 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 CUL2Q13617 745 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 PEAR1Q5VY43 1037 aaPredicted RBP12.09□□□□□ -0.47
CASC4-205ENST00000558735 EGFLAMQ63HQ2 1017 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 TMEFF1Q8IYR6 380 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 PGBD3Q8N328 593 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 DEFB124Q8NES8 71 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 PIGKQ92643 395 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 BHMTQ93088 406 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 SMARCE1Q969G3 411 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 SLC35C1Q96A29 364 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 TSG101Q99816 390 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 FAM124BQ9H5Z6 455 aaPredicted RBP12.09□□□□□ -0.47
CASC4-205ENST00000558735 TMEM74BQ9NUR3 256 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 BCCIPQ9P287 314 aaKnown RBP eCLIP12.09□□□□□ -0.47
CASC4-205ENST00000558735 ARMCX3Q9UH62 379 aaPredicted RBP12.09□□□□□ -0.47
CASC4-205ENST00000558735 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
CASC4-205ENST00000558735 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
CASC4-205ENST00000558735 PCNX2A6NKB5 2137 aa12.08□□□□□ -0.47
CASC4-205ENST00000558735 HYAL3O43820 417 aaPredicted RBP12.08□□□□□ -0.48
CASC4-205ENST00000558735 HMBSP08397 361 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 HOXB2P14652 356 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 PTGER3P43115 390 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 DGKGP49619 791 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 TKTL1P51854 596 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 YWHAGP61981 247 aaKnown RBP eCLIP12.08□□□□□ -0.48
CASC4-205ENST00000558735 LRRC63Q05C16 580 aa12.08□□□□□ -0.48
CASC4-205ENST00000558735 PDE4CQ08493 712 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms