RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 GPR15P49685 360 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 HEATR6Q6AI08 1181 aaKnown RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 ARHGEF18Q6ZSZ5 1173 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 PAQR9Q6ZVX9 377 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 CENPUQ71F23 418 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 RTN4RL1Q86UN2 441 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 MIB1Q86YT6 1006 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 TMEM86AQ8N2M4 240 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 MYCBPAPQ8TBZ2 947 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 CELF6Q96J87 481 aaKnown RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 LGMNQ99538 433 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 NACA2Q9H009 215 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 POPDC2Q9HBU9 364 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 TMBIM4Q9HC24 238 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 SFMBT1Q9UHJ3 866 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 TTC3P53804 2025 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 CCDC78A2IDD5 438 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 HMGB1P1B2RPK0 211 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 EEF2KO00418 725 aaKnown RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 LTFP02788 710 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 SELPP16109 830 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 RPL9P32969 192 aaKnown RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 LRRTM3Q86VH5 581 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 MREGQ8N565 214 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 USP33Q8TEY7 942 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 NINJ2Q9NZG7 142 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 CDH9Q9ULB4 789 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 CEP290O15078 2479 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 TCRBV7S3A2A0A539 114 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 DNALI1O14645 258 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 EPHB2P29323 1055 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 SSTR1P30872 391 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 HOXC8P31273 242 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 TPI1P60174 286 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 BFSP2Q13515 415 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 CCSAPQ6IQ19 270 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 KCNT2Q6UVM3 1135 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 SYDE1Q6ZW31 735 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 PDIK1LQ8N165 341 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 ARFGAP2Q8N6H7 521 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 PLD5Q8N7P1 536 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 GDAP1Q8TB36 358 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 KCTD15Q96SI1 283 aaPredicted RBP11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 WDCPQ9H6R7 721 aa11.22□□□□□ -0.61
CSPG4P5-201ENST00000558731 ANK1P16157 1881 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 SCAMP3O14828 347 aaKnown RBP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 NEFHP12036 1026 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 RPL17P18621 184 aaKnown RBP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 DNAJB2P25686 324 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 HNRNPH1P31943 449 aaKnown RBP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 TAF12Q16514 161 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 LHX8Q68G74 356 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 DENND5BQ6ZUT9 1274 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 HIPK3Q9H422 1215 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 DMAP1Q9NPF5 467 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 PIGVQ9NUD9 493 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 IKBKGQ9Y6K9 419 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 MDM4O15151 490 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 SKIP12755 728 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 DRG2P55039 364 aaKnown RBP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 INTS6LQ5JSJ4 861 aaKnown RBP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 KDELC2Q7Z4H8 507 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 ZDHHC17Q8IUH5 632 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 CCHCR1Q8TD31 782 aa11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 KLF6Q99612 283 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P5-201ENST00000558731 GOLGA8RI6L899 631 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 SPAG7O75391 227 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 NOS2P35228 1153 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 SEPT7Q16181 437 aaKnown RBP11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 XKR4Q5GH76 650 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 TP53INP2Q8IXH6 220 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 SEPT8Q92599 483 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 ARHGEF2Q92974 986 aaKnown RBP11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 TKTL2Q9H0I9 626 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 PCDH9Q9HC56 1237 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 SIP14410 1827 aa11.21□□□□□ -0.62
CSPG4P5-201ENST00000558731 LAMA3Q16787 3333 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 C3orf70A6NLC5 250 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 TTC4O95801 387 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 VIMP08670 466 aaKnown RBP11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 EIF3BP55884 814 aaKnown RBP11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 ARL4CP56559 192 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 ACAP1Q15027 740 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 PDK2Q15119 407 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 SLC25A52Q3SY17 297 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 DCLRE1AQ6PJP8 1040 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 ZMIZ2Q8NF64 920 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 GIPC2Q8TF65 315 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 CSPG4P5Q96PW8 444 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 DFFAO00273 331 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 CLGNO14967 610 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 TRAPPC3O43617 180 aa11.2□□□□□ -0.62
CSPG4P5-201ENST00000558731 ALDH2P05091 517 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms