RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 KCTD15Q96SI1 283 aaPredicted RBP8.5□□□□□ -1.05
TRAF3-205ENST00000558700 HNRNPABQ99729 332 aaKnown RBP8.5□□□□□ -1.05
TRAF3-205ENST00000558700 GTPBP4Q9BZE4 634 aaKnown RBP8.5□□□□□ -1.05
TRAF3-205ENST00000558700 TPSD1Q9BZJ3 242 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 ARRDC1-AS1Q9H2J1 176 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 FAM124BQ9H5Z6 455 aaPredicted RBP8.5□□□□□ -1.05
TRAF3-205ENST00000558700 POLMQ9NP87 494 aaPredicted RBP8.5□□□□□ -1.05
TRAF3-205ENST00000558700 VPS45Q9NRW7 570 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 MAPK8IP1Q9UQF2 711 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 NCOR2Q9Y618 2525 aa8.5□□□□□ -1.05
TRAF3-205ENST00000558700 MYOFQ9NZM1 2061 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 DCDC2BA2VCK2 349 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 GOLGA6L4A6NEF3 574 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 CETN3O15182 167 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 SLC16A3O15427 465 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 BEST1O76090 585 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 KLF8O95600 359 aaPredicted RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 ACO1P21399 889 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 VAMP1P23763 118 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 SF3A2Q15428 464 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 CRY1Q16526 586 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 PLA2G2CQ5R387 149 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 PMS2CLQ68D20 193 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 RHBDF2Q6PJF5 856 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 GPRIN1Q7Z2K8 1008 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 TRMT11Q7Z4G4 463 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 TADA2BQ86TJ2 420 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 BBS7Q8IWZ6 715 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 ETFBKMTQ8IXQ9 262 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 CCDC33Q8N5R6 958 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 ALLCQ8N6M5 410 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 C12orf29Q8N999 325 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 TERB1Q8NA31 727 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 IL17RCQ8NAC3 791 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 TXNDC5Q8NBS9 432 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 FBXL13Q8NEE6 735 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 CYFIP2Q96F07 1278 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 TWNKQ96RR1 684 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 CDK5RAP1Q96SZ6 601 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 TSG101Q99816 390 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 APOBEC3GQ9HC16 384 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 CYLDQ9NQC7 956 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 SPHK2Q9NRA0 654 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 POLR3BQ9NW08 1133 aaPredicted RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 DEC1Q9P2X7 70 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 CHORDC1Q9UHD1 332 aaPredicted RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 HOOK1Q9UJC3 728 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 SCML2Q9UQR0 700 aa8.49□□□□□ -1.05
TRAF3-205ENST00000558700 TNRC6BQ9UPQ9 1833 aaKnown RBP8.49□□□□□ -1.05
TRAF3-205ENST00000558700 THADAQ6YHU6 1953 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 A0A1W2PQH9 124 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 TBC1D3BA6NDS4 549 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 HHLA1C9JL84 531 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 CACNG3O60359 315 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 GDF9O60383 454 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 TULP3O75386 442 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 SMC2O95347 1197 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 ATP5C1P36542 298 aaKnown RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 TNFRSF4P43489 277 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 KIR2DL1P43626 348 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 SLC6A11P48066 632 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 SLC8A3P57103 927 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 YWHAEP62258 255 aaKnown RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 CREB5Q02930 508 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 PNOCQ13519 176 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 CCDC6Q16204 474 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 ANO4Q32M45 955 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 COBLL1Q53SF7 1204 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 DCAF17Q5H9S7 520 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 PPM1JQ5JR12 505 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 C10orf76Q5T2E6 689 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 TCERG1LQ5VWI1 586 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 GRAMD4Q6IC98 578 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 KLHDC10Q6PID8 442 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 HTR3DQ70Z44 454 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 CCDC186Q7Z3E2 898 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 CYP2U1Q7Z449 544 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 TTC30AQ86WT1 665 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 SMYD4Q8IYR2 804 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 ZNF513Q8N8E2 541 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 MDGA1Q8NFP4 955 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 KCTD12Q96CX2 325 aaKnown RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 GSDMAQ96QA5 445 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 XPO6Q96QU8 1125 aaKnown RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 EDEM2Q9BV94 578 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 DUSP16Q9BY84 665 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 DUSP15Q9H1R2 295 aaPredicted RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 DNAJC17Q9NVM6 304 aaKnown RBP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRAF3-205ENST00000558700 ZNF358Q9NW07 568 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 MARK1Q9P0L2 795 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 DNMT3LQ9UJW3 386 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 NAGPAQ9UK23 515 aa8.48□□□□□ -1.05
TRAF3-205ENST00000558700 A0A0A0MRY4 1105 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 TCRBV21S2A2A0A5A6 115 aa8.47□□□□□ -1.05
TRAF3-205ENST00000558700 BCLAF3A2AJT9 711 aaKnown RBP8.47□□□□□ -1.05
TRAF3-205ENST00000558700 NEDD8-MDP1E9PL57 170 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms