RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 FAM20AQ96MK3 541 aa6.63□□□□□ -1.35
ZEB1-211ENST00000558440 JAKMIP1Q96N16 626 aaKnown RBP6.63□□□□□ -1.35
ZEB1-211ENST00000558440 CLSTN3Q9BQT9 956 aa6.63□□□□□ -1.35
ZEB1-211ENST00000558440 MRPS23Q9Y3D9 190 aaKnown RBP6.63□□□□□ -1.35
ZEB1-211ENST00000558440 AKAP13Q12802 2813 aa6.63□□□□□ -1.35
ZEB1-211ENST00000558440 EML5Q05BV3 1969 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 NUP210Q8TEM1 1887 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CCDC194A0A1B0GVG4 234 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CASTOR2A6NHX0 329 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CPLX1O14810 134 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 SLC30A4O14863 429 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 SLC37A4O43826 429 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 LRP3O75074 770 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 RETP07949 1114 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 TGM1P22735 817 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CCR3P51677 355 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 SLURP1P55000 103 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CYP4A11Q02928 519 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 POU5F1BQ06416 359 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 SSRP1Q08945 709 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CAPSQ13938 189 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CTTNQ14247 550 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 EPHA7Q15375 998 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 GTF2IRD2BQ6EKJ0 949 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 PPP4R3AQ6IN85 833 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 GALNT17Q6IS24 598 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 GTF2IRD2Q86UP8 949 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CDR2LQ86X02 465 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CELF5Q8N6W0 485 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 GSTCDQ8NEC7 633 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 LNX1Q8TBB1 728 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CPA5Q8WXQ8 436 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 DNASE1L2Q92874 299 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 DYDC2Q96IM9 177 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 MRGPRX3Q96LB0 322 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 YTHDC1Q96MU7 727 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 NAP1L4Q99733 375 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 PAAF1Q9BRP4 392 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 IER2Q9BTL4 223 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 ZSWIM4Q9H7M6 989 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 BRD9Q9H8M2 597 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CAPN10Q9HC96 672 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 NCOA5Q9HCD5 579 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 GPRC5CQ9NQ84 441 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 HEBP1Q9NRV9 189 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 HCFC1R1Q9NWW0 138 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 GDE1Q9NZC3 331 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 WRAP73Q9P2S5 460 aaPredicted RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 DNMT3BQ9UBC3 853 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 CACNG4Q9UBN1 327 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 NDRG2Q9UN36 371 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.62□□□□□ -1.35
ZEB1-211ENST00000558440 SPEGQ15772 3267 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 NUP205Q92621 2012 aa6.62□□□□□ -1.35
ZEB1-211ENST00000558440 DMXL2Q8TDJ6 3036 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 A0A1B0GUA9 196 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 SH3D21A4FU49 640 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 SMAD7O15105 426 aaKnown RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 TBX3O15119 743 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 ADAM12O43184 909 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 B4GALT5O43286 388 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 CCNT1O60563 726 aaKnown RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 DEXIO95424 95 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 BAG4O95429 457 aaKnown RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 LRG1P02750 347 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 THP07101 528 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 THBDP07204 575 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 RHOP08100 348 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 GCFC2P16383 781 aaKnown RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 RPS6KB1P23443 525 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 PDIA3P30101 505 aaKnown RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 OR1D2P34982 312 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 KCNC1P48547 511 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 DMWDQ09019 674 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 RAB33AQ14088 237 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 SIM2Q14190 667 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 BMP2KLQ5H9B9 411 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 TANGO2Q6ICL3 276 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 CPLX2Q6PUV4 134 aaKnown RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 RTL10Q7L3V2 364 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 NEK8Q86SG6 692 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 TPH2Q8IWU9 490 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 FAM177A1Q8N128 213 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 PLEKHO2Q8TD55 490 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 USP33Q8TEY7 942 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 DDX1Q92499 740 aaKnown RBP6.61□□□□□ -1.35
ZEB1-211ENST00000558440 ELSPBP1Q96BH3 223 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 NFKBIZQ9BYH8 718 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 PLA2G2FQ9BZM2 168 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 KCNMB3Q9NPA1 279 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 XPNPEP1Q9NQW7 623 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 SEMA4GQ9NTN9 838 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 ACTR10Q9NZ32 417 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 RGL1Q9NZL6 768 aa6.61□□□□□ -1.35
ZEB1-211ENST00000558440 CDY1Q9Y6F8 540 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms