RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 TLR6Q9Y2C9 796 aa12.5□□□□□ -0.41
APEX1-219ENST00000557365 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.5□□□□□ -0.41
APEX1-219ENST00000557365 C2orf16Q68DN1 1984 aa12.5□□□□□ -0.41
APEX1-219ENST00000557365 CTAGE9A4FU28 777 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 MDM4O15151 490 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 IGLV3-27P01718 113 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 MIPP30301 263 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 GTF2F1P35269 517 aaKnown RBP eCLIP12.49□□□□□ -0.41
APEX1-219ENST00000557365 PEX5P50542 639 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 ZNF135P52742 658 aaPredicted RBP12.49□□□□□ -0.41
APEX1-219ENST00000557365 SLC7A9P82251 487 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 COG7P83436 770 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 ATP11AP98196 1134 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 SLC25A11Q02978 314 aaKnown RBP12.49□□□□□ -0.41
APEX1-219ENST00000557365 DEUP1Q05D60 604 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 SCAPQ12770 1279 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 RPS6KA1Q15418 735 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 TRIP4Q15650 581 aaPredicted RBP12.49□□□□□ -0.41
APEX1-219ENST00000557365 ARHGAP15Q53QZ3 475 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 TAC4Q86UU9 113 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 HS6ST3Q8IZP7 471 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 UBL4BQ8N7F7 174 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 SHKBP1Q8TBC3 707 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 AZIN2Q96A70 460 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 WDR24Q96S15 920 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 NAPGQ99747 312 aaPredicted RBP12.49□□□□□ -0.41
APEX1-219ENST00000557365 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 ADAM7Q9H2U9 754 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 IGFLR1Q9H665 355 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 TASP1Q9H6P5 420 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 DDIT4Q9NX09 232 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 DDX56Q9NY93 547 aaKnown RBP12.49□□□□□ -0.41
APEX1-219ENST00000557365 MARCH2Q9P0N8 246 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 USP18Q9UMW8 372 aa12.49□□□□□ -0.41
APEX1-219ENST00000557365 HELZP42694 1942 aaKnown RBP12.49□□□□□ -0.41
APEX1-219ENST00000557365 TMEM110-MUSTN1A8MSY1 372 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 ZNF487B1APH4 448 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 COCHO43405 550 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 PRPSAP2O60256 369 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 MOSPD3O75425 235 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 FTCDO95954 541 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 MYL4P12829 197 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 TNNT1P13805 278 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 TCF3P15923 654 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 TFE3P19532 575 aaPredicted RBP12.48□□□□□ -0.41
APEX1-219ENST00000557365 CCR1P32246 355 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 TUBB2AQ13885 445 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 ARL13BQ3SXY8 428 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 HABP4Q5JVS0 413 aaKnown RBP12.48□□□□□ -0.41
APEX1-219ENST00000557365 SH3PXD2AQ5TCZ1 1133 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 KATNAL2Q8IYT4 538 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 EXD1Q8NHP7 514 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 FAM71BQ8TC56 605 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 MSLNLQ96KJ4 702 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 C16orf45Q96MC5 204 aaPredicted RBP12.48□□□□□ -0.41
APEX1-219ENST00000557365 HAPLN3Q96S86 360 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 TUBB2BQ9BVA1 445 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 CARD9Q9H257 536 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 CCSER2Q9H7U1 834 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 FAM204AQ9H8W3 233 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 PIDD1Q9HB75 910 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 PIGVQ9NUD9 493 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 HCFC1R1Q9NWW0 138 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 ARHGEF38Q9NXL2 777 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.48□□□□□ -0.41
APEX1-219ENST00000557365 CLEC1BQ9P126 229 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 DNAI1Q9UI46 699 aa12.48□□□□□ -0.41
APEX1-219ENST00000557365 NUP210Q8TEM1 1887 aaPredicted RBP12.47□□□□□ -0.41
APEX1-219ENST00000557365 TRAV19A0A0A6YYK7 116 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 A0A1W2PRU2 124 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 KCNU1A8MYU2 1149 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 DDX3YO15523 660 aaKnown RBP12.47□□□□□ -0.41
APEX1-219ENST00000557365 LINC01565O15544 149 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 LATS1O95835 1130 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 TCP1P17987 556 aaKnown RBP12.47□□□□□ -0.41
APEX1-219ENST00000557365 HDCP19113 662 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 CASQ1P31415 396 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 ADRA1BP35368 520 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 LTBRP36941 435 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 CCR2P41597 374 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 MTHFRP42898 656 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 RWDD2BP57060 319 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 TBX4P57082 545 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 TAS2R40P59535 323 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 COPS2P61201 443 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 PITX1P78337 314 aaPredicted RBP12.47□□□□□ -0.41
APEX1-219ENST00000557365 RBM10P98175 930 aaKnown RBP12.47□□□□□ -0.41
APEX1-219ENST00000557365 NRG1Q02297 640 aaPredicted RBP12.47□□□□□ -0.41
APEX1-219ENST00000557365 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 PDK2Q15119 407 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 CDO1Q16878 200 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 ATAT1Q5SQI0 421 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 ERMARDQ5T6L9 678 aa12.47□□□□□ -0.41
APEX1-219ENST00000557365 NUGGCQ68CJ6 796 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms