RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 COBLL1Q53SF7 1204 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 ZNF658Q5TYW1 1059 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-213ENST00000557262 TCERG1LQ5VWI1 586 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 LYSMD4Q5XG99 296 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 PSAPL1Q6NUJ1 521 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 FMR1NBQ8N0W7 255 aaPredicted RBP16.68■□□□□ 0.26
TUBB3-213ENST00000557262 BHMTQ93088 406 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 ARID3AQ99856 593 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 GABRG3Q99928 467 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 CD248Q9HCU0 757 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 CALCOCO1Q9P1Z2 691 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 RASAL2Q9UJF2 1139 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 PILRBQ9UKJ0 227 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 CHD8Q9HCK8 2581 aa16.68■□□□□ 0.26
TUBB3-213ENST00000557262 GOLGA6L4A6NEF3 574 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 HMBSP08397 361 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 CSRP1P21291 193 aaKnown RBP16.67■□□□□ 0.26
TUBB3-213ENST00000557262 RPL6Q02878 288 aaKnown RBP16.67■□□□□ 0.26
TUBB3-213ENST00000557262 ANKRD40Q6AI12 368 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 PM20D1Q6GTS8 502 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 KIAA1211LQ6NV74 962 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 SLC23A3Q6PIS1 610 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
TUBB3-213ENST00000557262 STRIP2Q9ULQ0 834 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 SLC27A6Q9Y2P4 619 aa16.67■□□□□ 0.26
TUBB3-213ENST00000557262 SLC16A3O15427 465 aaKnown RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 SMC2O95347 1197 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 PENKP01210 267 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 CEACAM1P13688 526 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 NDUFV2P19404 249 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 ITPKAP23677 461 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 CORO1AP31146 461 aaKnown RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 HOXD12P35452 270 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 TKTL1P51854 596 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 YWHAGP61981 247 aaKnown RBP eCLIP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 ST3GAL2Q16842 350 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 DUOXA1Q1HG43 343 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 UAP1L1Q3KQV9 507 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 DCAF17Q5H9S7 520 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 SH3PXD2AQ5TCZ1 1133 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 FYB2Q5VWT5 728 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 PEAR1Q5VY43 1037 aaPredicted RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 RSRC2Q7L4I2 434 aaKnown RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 DENND1CQ8IV53 801 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 ZC3H3Q8IXZ2 948 aaKnown RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 DEFB119Q8N690 84 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 ENGASEQ8NFI3 743 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 CEP76Q8TAP6 659 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 P2RY11Q96G91 374 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 CACNA2D2Q9NY47 1150 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 MARCH2Q9P0N8 246 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 AGO1Q9UL18 857 aaKnown RBP16.66■□□□□ 0.26
TUBB3-213ENST00000557262 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
TUBB3-213ENST00000557262 IGHV1OR15-9A0A0B4J2B8 117 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 SLC12A8A0AV02 714 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 WASH3PC4AMC7 463 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 GIPC1O14908 333 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 NPC1O15118 1278 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 KRT37O76014 449 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 ZBED1O96006 694 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
TUBB3-213ENST00000557262 YWHAEP62258 255 aaKnown RBP16.65■□□□□ 0.26
TUBB3-213ENST00000557262 LRRC63Q05C16 580 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 ZNF33AQ06730 810 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 PDE4CQ08493 712 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 CUL2Q13617 745 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 SGO2Q562F6 1265 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 SPATA20Q8TB22 786 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 SMARCE1Q969G3 411 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 HESX1Q9UBX0 185 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 ARMCX3Q9UH62 379 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-213ENST00000557262 TSPAN16Q9UKR8 245 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 KIAA1257Q9ULG3 409 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 RAD54BQ9Y620 910 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 MAP1BP46821 2468 aaKnown RBP16.65■□□□□ 0.26
TUBB3-213ENST00000557262 KMT2BQ9UMN6 2715 aaPredicted RBP16.65■□□□□ 0.26
TUBB3-213ENST00000557262 GON4LQ3T8J9 2241 aa16.65■□□□□ 0.26
TUBB3-213ENST00000557262 XPO1O14980 1071 aaKnown RBP16.64■□□□□ 0.25
TUBB3-213ENST00000557262 CYBBP04839 570 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 CFIP05156 583 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 SERPINF2P08697 491 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 ENGP17813 658 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 ZNF132P52740 706 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 BCAT1P54687 386 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 MFAP3P55082 362 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 E2F5Q15329 346 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 GOLGA7BQ2TAP0 167 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 RABEPKQ7Z6M1 372 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 CPXM2Q8N436 756 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 UCMAQ8WVF2 138 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
TUBB3-213ENST00000557262 SLC35C1Q96A29 364 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 ERLEC1Q96DZ1 483 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 MRGPRX1Q96LB2 322 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 TIGD1Q96MW7 591 aa16.64■□□□□ 0.25
TUBB3-213ENST00000557262 ULBP1Q9BZM6 244 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms