RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FOXO1Q12778 655 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 MAP3K12Q12852 859 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 STX3Q13277 289 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 KCNAB1Q14722 419 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 R3HDM1Q15032 1099 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 HADHQ16836 314 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 TMEM266Q2M3C6 531 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ANKRD20A8PQ5CZ79 823 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 GPR139Q6DWJ6 353 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 RAB12Q6IQ22 244 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 WDR93Q6P2C0 686 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ARHGAP11AQ6P4F7 1023 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 C1orf228Q6PIY5 440 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 TMC5Q6UXY8 1006 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 SPOCD1Q6ZMY3 1216 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 Q6ZUG5 572 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 GALNTL5Q7Z4T8 443 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 HOMER1Q86YM7 354 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 JAMLQ86YT9 394 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 NRSN1Q8IZ57 195 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 TTC5Q8N0Z6 440 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 RBBP8NLQ8NC74 664 aaPredicted RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 FLAD1Q8NFF5 587 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 OR56B2PQ8NGI1 322 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ASZ1Q8WWH4 475 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 RUBCNQ92622 972 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 HDAC2Q92769 488 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 GATA6Q92908 595 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ISL2Q96A47 359 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 RAB7BQ96AH8 199 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 SHDQ96IW2 340 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 MEGF10Q96KG7 1140 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 CNOT6LQ96LI5 555 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 AIFM3Q96NN9 605 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 EYA3Q99504 573 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 TM9SF2Q99805 663 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 SYT15Q9BQS2 421 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ZNF341Q9BYN7 854 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 ABCG8Q9H221 673 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 SH2D4AQ9H788 454 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 TMEM206Q9H813 350 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.42□□□□□ -1.38
TDP1-215ENST00000556498 LZTFL1Q9NQ48 299 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 TOPORSQ9NS56 1045 aaPredicted RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 NUP50Q9UKX7 468 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 RPL26L1Q9UNX3 145 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 LRCH1Q9Y2L9 728 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 DAGLAQ9Y4D2 1042 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.42□□□□□ -1.38
TDP1-215ENST00000556498 SESN1Q9Y6P5 492 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 CPDO75976 1380 aa6.42□□□□□ -1.38
TDP1-215ENST00000556498 CAMSAP2Q08AD1 1489 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ARAP1Q96P48 1450 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 UGGT2Q9NYU1 1516 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 A0A1B0GVC2 190 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ARGFXA6NJG6 315 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 VSTM5A8MXK1 200 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 E7EVH7 732 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 H0Y858 1186 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 GAS2O43903 313 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 GNA14O95837 355 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 TFRCP02786 760 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 CAPN1P07384 714 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 HMOX1P09601 288 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 WEE2P0C1S8 567 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 CLUP10909 449 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 CYP3A5P20815 502 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ATP5F1P24539 256 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 RXRBP28702 533 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ADSLP30566 484 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 GDI1P31150 447 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 TRHRP34981 398 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 PIP4K2AP48426 406 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 GIPRP48546 466 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SLC9A3P48764 834 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 POU3F4P49335 361 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ARFIP2P53365 341 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ARFIP1P53367 373 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 ATP12AP54707 1039 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 P2RX3P56373 397 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 EIF6P56537 245 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 RAB4BP61018 213 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 KCNJ10P78508 379 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 LACTBP83111 547 aaPredicted RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 HNRNPDQ14103 355 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 MLC1Q15049 377 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SF3B4Q15427 424 aaKnown RBP eCLIP6.41□□□□□ -1.38
TDP1-215ENST00000556498 TAF12Q16514 161 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 DPYSL2Q16555 572 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 AANATQ16613 207 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PHKG1Q16816 387 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 KRT24Q2M2I5 525 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PARP6Q2NL67 630 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 RBM20Q5T481 1227 aaKnown RBP6.41□□□□□ -1.38
TDP1-215ENST00000556498 NAA35Q5VZE5 725 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 HAUS3Q68CZ6 603 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 SLFN13Q68D06 897 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 NIPAL1Q6NVV3 410 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 CDPF1Q6NVV7 123 aa6.41□□□□□ -1.38
TDP1-215ENST00000556498 PAPD4Q6PIY7 484 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms