RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	SNX5	Q9Y5X3	404 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	PRPF4	O43172	522 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	CBX6	O95503	412 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	GHRHR	Q02643	423 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	CCDC15	Q0P6D6	951 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	LBR	Q14739	615 aa	Known RBP	12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	RIOX2	Q8IUF8	465 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	REPS2	Q8NFH8	660 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	ZMAT2	Q96NC0	199 aa	Known RBP	12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	ZNF229	Q9UJW7	825 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	HES2	Q9Y543	173 aa		12.7	□□□□□ -0.38
TMPO-212	ENST00000556029	SDK1	Q7Z5N4	2213 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	NFASC	O94856	1347 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029		A0A0B4J269	797 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	EDF1	O60869	148 aa	Known RBP	12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	AKAP5	P24588	427 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ADRA1D	P25100	572 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	MGAT5	Q09328	741 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	FAM71D	Q8N9W8	422 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ULK4	Q96C45	1275 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	EBF2	Q9HAK2	575 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ZFYVE28	Q9HCC9	887 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	KIF1C	O43896	1103 aa	Known RBP	12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ITGAV	P06756	1048 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	TGFB3	P10600	412 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	MPZL3	Q6UWV2	235 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ACOT1	Q86TX2	421 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	MTMR14	Q8NCE2	650 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	RAET1E	Q8TD07	263 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	MIEF2	Q96C03	454 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	KPNA7	A9QM74	516 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ROR1	Q01973	937 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	MTDH	Q86UE4	582 aa	Known RBP	12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	TDRP	Q86YL5	185 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	WDR49	Q8IV35	697 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	DNAJB3	Q8WWF6	145 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ZNF518B	Q9C0D4	1074 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	RUBCNL	Q9H714	662 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	CHKB	Q9Y259	395 aa		12.69	□□□□□ -0.38
TMPO-212	ENST00000556029	SPATA31C2	B4DYI2	1134 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	B4GALT5	O43286	388 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	RBP3	P10745	1247 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	MLH1	P40692	756 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	KPNA2	P52292	529 aa	Known RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	ZNF280A	P59817	542 aa	Predicted RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	BRSK2	Q8IWQ3	736 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	NDUFAF2	Q8N183	169 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	WWP1	Q9H0M0	922 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	BATF3	Q9NR55	127 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	C20orf96	Q9NUD7	363 aa	Predicted RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	ZNF214	Q9UL59	606 aa	Predicted RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	AKAP10	O43572	662 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	ASS1	P00966	412 aa	Known RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	CDKN2B	P42772	138 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	BLVRA	P53004	296 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	STX3	Q13277	289 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	ARL13B	Q3SXY8	428 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	TCP10L	Q8TDR4	215 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	OTULIN	Q96BN8	352 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	HAPLN2	Q9GZV7	340 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	MANSC1	Q9H8J5	431 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	PDLIM7	Q9NR12	457 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	MID2	Q9UJV3	735 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	RGS20	O76081	388 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	STBD1	O95210	358 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	CCNB1	P14635	433 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	EPHB2	P29323	1055 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	CLDN10	P78369	228 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	OGDH	Q02218	1023 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	FAM117B	Q6P1L5	589 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	OTOA	Q7RTW8	1153 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	FAM136A	Q96C01	138 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	DONSON	Q9NYP3	566 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	MOSPD1	Q9UJG1	213 aa		12.68	□□□□□ -0.38
TMPO-212	ENST00000556029	LINC00854	A0A1B0GVQ3	168 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	GCLC	P48506	637 aa	Predicted RBP	12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	LBX2	Q6XYB7	198 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	USP50	Q70EL3	339 aa	Predicted RBP	12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	KIAA2013	Q8IYS2	634 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	HASPIN	Q8TF76	798 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	NKD2	Q969F2	451 aa	Predicted RBP	12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	EGFL8	Q99944	293 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	ZC4H2	Q9NQZ6	224 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	MAN1A2	O60476	641 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	COL11A2	P13942	1736 aa	Predicted RBP	12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	CAPS	Q13938	189 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	TMEM63B	Q5T3F8	832 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	SPATA18	Q8TC71	538 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	GIPC2	Q8TF65	315 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	LRMDA	Q9H2I8	198 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	CAAP1	Q9H8G2	361 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	SNTG2	Q9NY99	539 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	STYXL1	Q9Y6J8	313 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	SNX2	O60749	519 aa		12.67	□□□□□ -0.38
TMPO-212	ENST00000556029	CCDC22	O60826	627 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms