RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 CDC42EP1Q00587 391 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 FAM174BQ3ZCQ3 159 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 TMEM164Q5U3C3 297 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 GIMAP6Q6P9H5 292 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 XKRXQ6PP77 449 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 ZNF410Q86VK4 478 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 LRRC15Q8TF66 581 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 KIAA1143Q96AT1 154 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-215ENST00000556011 HAPLN3Q96S86 360 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 SDF4Q9BRK5 362 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 IFT122Q9HBG6 1241 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 MRPS18BQ9Y676 258 aaKnown RBP8.08□□□□□ -1.12
PSEN1-215ENST00000556011 TRIP11Q15643 1979 aa8.08□□□□□ -1.12
PSEN1-215ENST00000556011 A6NCN8 305 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 ESPNB1AK53 854 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 E2F3O00716 465 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 RANBP6O60518 1105 aaKnown RBP8.07□□□□□ -1.12
PSEN1-215ENST00000556011 NEBLO76041 1014 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 NFKBIAP25963 317 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 EXOSC9Q06265 439 aaKnown RBP8.07□□□□□ -1.12
PSEN1-215ENST00000556011 CRTC2Q53ET0 693 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-215ENST00000556011 CENPPQ6IPU0 288 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 C12orf54Q6X4T0 127 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 RPTNQ6XPR3 784 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 PIK3AP1Q6ZUJ8 805 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 WDR48Q8TAF3 677 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 ZMYND19Q96E35 227 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-215ENST00000556011 CPB2Q96IY4 423 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 STRBPQ96SI9 672 aaKnown RBP8.07□□□□□ -1.12
PSEN1-215ENST00000556011 TRPC7Q9HCX4 862 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 ZNF358Q9NW07 568 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 DNAJB12Q9NXW2 375 aaKnown RBP8.07□□□□□ -1.12
PSEN1-215ENST00000556011 DEC1Q9P2X7 70 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 UBIAD1Q9Y5Z9 338 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 STON1Q9Y6Q2 735 aa8.07□□□□□ -1.12
PSEN1-215ENST00000556011 STAB2Q8WWQ8 2551 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 FAM47DPA6NHR8 397 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 PRRT4C9JH25 899 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 DDX39AO00148 427 aaKnown RBP8.06□□□□□ -1.12
PSEN1-215ENST00000556011 GFRA2O00451 464 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 SYN3O14994 580 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 MUSKO15146 869 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 GABBR2O75899 941 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 MAP3K6O95382 1288 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 THP07101 528 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 CCKBRP32239 447 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 CHRNA4P43681 627 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 ITGB3BPQ13352 177 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-215ENST00000556011 PTK2BQ14289 1009 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 TAF12Q16514 161 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 DEFB113Q30KQ7 82 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 PAPD7Q5XG87 772 aaKnown RBP8.06□□□□□ -1.12
PSEN1-215ENST00000556011 PLEKHA7Q6IQ23 1121 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 NUDT18Q6ZVK8 323 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 CAMKMTQ7Z624 323 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 KCNMB4Q86W47 210 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 RAB11FIP4Q86YS3 637 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 ATAD1Q8NBU5 361 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 GIPC2Q8TF65 315 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 MRPS31Q92665 395 aaKnown RBP8.06□□□□□ -1.12
PSEN1-215ENST00000556011 PPP1R13BQ96KQ4 1090 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 CCDC3Q9BQI4 270 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 TRIM9Q9C026 710 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 POLHQ9Y253 713 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 GTF3C1Q12789 2109 aa8.06□□□□□ -1.12
PSEN1-215ENST00000556011 D6RAR5 112 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 ADH1CP00326 375 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 USP17L7P0C7H9 530 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 PBX1P40424 430 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 ZXDBP98169 803 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 ERV3-1Q14264 604 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 JAKMIP3Q5VZ66 844 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 ZNF280DQ6N043 979 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 HIPK1Q86Z02 1210 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 APLFQ8IW19 511 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-215ENST00000556011 HACE1Q8IYU2 909 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 EAF2Q96CJ1 260 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-215ENST00000556011 ZNF559Q9BR84 538 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 TRIM6Q9C030 488 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-215ENST00000556011 B3GNT4Q9C0J1 378 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 PDE7BQ9NP56 450 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 FGF21Q9NSA1 209 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 CDC42EP3Q9UKI2 254 aa8.05□□□□□ -1.12
PSEN1-215ENST00000556011 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.05□□□□□ -1.12
PSEN1-215ENST00000556011 PCDHGA9Q9Y5G4 932 aaKnown RBP8.05□□□□□ -1.12
PSEN1-215ENST00000556011 FRMD3A2A2Y4 597 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 CCL4P13236 92 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 PRKCSHP14314 528 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-215ENST00000556011 ATF6P18850 670 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 TRAPPC10P48553 1259 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 ZNF235Q14590 738 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 ASIC2Q16515 512 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 LONRF1Q17RB8 773 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 SLC45A4Q5BKX6 768 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 C10orf62Q5T681 223 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-215ENST00000556011 IFNL3Q8IZI9 196 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 SERAC1Q96JX3 654 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 KCNH7Q9NS40 1196 aa8.04□□□□□ -1.12
PSEN1-215ENST00000556011 SUCLA2Q9P2R7 463 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-215ENST00000556011 PCDHA12Q9UN75 941 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms