RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 RAB41Q5JT25 222 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 EGFLAMQ63HQ2 1017 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 TMEM270Q6UE05 265 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 DENND1CQ8IV53 801 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 UBA3Q8TBC4 463 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 UCMAQ8WVF2 138 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 PIGKQ92643 395 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 GOLGA1Q92805 767 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 EDEM2Q9BV94 578 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
SNX6-205ENST00000555648 CEP250Q9BV73 2442 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 HELZP42694 1942 aaKnown RBP16.16■□□□□ 0.18
SNX6-205ENST00000555648 ZNF292O60281 2723 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 ATG2BQ96BY7 2078 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 P4HA2O15460 535 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 PAEPP09466 180 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 P2RY2P41231 377 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 DPP6P42658 865 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 ADIGQ0VDE8 80 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 STILQ15468 1287 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 TCEAL6Q6IPX3 200 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 SLC36A4Q6YBV0 504 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 TOGARAM2Q6ZUX3 1019 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 ARMCX6Q7L4S7 300 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 OLIG1Q8TAK6 271 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 DDI1Q8WTU0 396 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 TCEAL3Q969E4 200 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 PLD4Q96BZ4 506 aa16.16■□□□□ 0.18
SNX6-205ENST00000555648 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 PMM2O15305 246 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 AP5Z1O43299 807 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 ZNF217O75362 1048 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 LCP1P13796 627 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 CD44P16070 742 aaKnown RBP16.15■□□□□ 0.18
SNX6-205ENST00000555648 STX17P56962 302 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 ARID5AQ03989 594 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 PAK1Q13153 545 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 STARD3Q14849 445 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 DAB2IPQ5VWQ8 1189 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 LYSMD4Q5XG99 296 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 PM20D1Q6GTS8 502 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 TTI2Q6NXR4 508 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 CREBRFQ8IUR6 639 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 FMNL3Q8IVF7 1028 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 TMEFF1Q8IYR6 380 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 CNGB3Q9NQW8 809 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 RXFP3Q9NSD7 469 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 ABCC13Q9NSE7 274 aa16.15■□□□□ 0.18
SNX6-205ENST00000555648 AGO1Q9UL18 857 aaKnown RBP16.15■□□□□ 0.18
SNX6-205ENST00000555648 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNX6-205ENST00000555648 PRRT4C9JH25 899 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 M0QYV0 167 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 TULP2O00295 520 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 O00370 1275 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 GFRA2O00451 464 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 KLKB1P03952 638 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 GABRG2P18507 467 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 RPL6Q02878 288 aaKnown RBP16.14■□□□□ 0.17
SNX6-205ENST00000555648 MORC3Q14149 939 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 MAP7D1Q3KQU3 841 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 BSPRYQ5W0U4 402 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 LCLAT1Q6UWP7 414 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 IPO4Q8TEX9 1081 aaKnown RBP16.14■□□□□ 0.17
SNX6-205ENST00000555648 KCTD13Q8WZ19 329 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 NDRG1Q92597 394 aaKnown RBP16.14■□□□□ 0.17
SNX6-205ENST00000555648 EDEM1Q92611 657 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 ERLEC1Q96DZ1 483 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 NUSAP1Q9BXS6 441 aaKnown RBP16.14■□□□□ 0.17
SNX6-205ENST00000555648 CACNA2D2Q9NY47 1150 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
SNX6-205ENST00000555648 HBS1LQ9Y450 684 aaKnown RBP16.14■□□□□ 0.17
SNX6-205ENST00000555648 SDK1Q7Z5N4 2213 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 PPP1R3GB7ZBB8 358 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 NPC1O15118 1278 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 SYNCRIPO60506 623 aaKnown RBP16.13■□□□□ 0.17
SNX6-205ENST00000555648 PENKP01210 267 aaPredicted RBP16.13■□□□□ 0.17
SNX6-205ENST00000555648 ADRB1P08588 477 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 CISD3P0C7P0 127 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 CHRM1P11229 460 aaPredicted RBP16.13■□□□□ 0.17
SNX6-205ENST00000555648 RGS7P49802 495 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 KCNH2Q12809 1159 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 LMAN2Q12907 356 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 CNGA2Q16280 664 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 KIAA1324Q6UXG2 1013 aaKnown RBP16.13■□□□□ 0.17
SNX6-205ENST00000555648 RRAGAQ7L523 313 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 ANKS1BQ7Z6G8 1248 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 SYT12Q8IV01 421 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 CPXM2Q8N436 756 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 RBBP8NLQ8NC74 664 aaPredicted RBP16.13■□□□□ 0.17
SNX6-205ENST00000555648 ACOX2Q99424 681 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 GABRG3Q99928 467 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 SRRTQ9BXP5 876 aaKnown RBP16.13■□□□□ 0.17
SNX6-205ENST00000555648 TMEM9BQ9NQ34 198 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 SLC27A6Q9Y2P4 619 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 RAD54BQ9Y620 910 aa16.13■□□□□ 0.17
SNX6-205ENST00000555648 A0A1W2PQF6 199 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 YJEFN3A6XGL0 299 aa16.12■□□□□ 0.17
SNX6-205ENST00000555648 C4orf47A7E2U8 309 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms