RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 UBA5Q9GZZ9 404 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 CCDC134Q9H6E4 229 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 DUSP22Q9NRW4 184 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 DLL3Q9NYJ7 618 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 C9orf78Q9NZ63 289 aaPredicted RBP6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 FEM1BQ9UK73 627 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 GJD2Q9UKL4 321 aa6.17□□□□□ -1.42
CKS1BP1-201ENST00000555221 RRN3P2A6NIE6 340 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 KIF28PB7ZC32 967 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 B9A039 149 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 GCOM1H8Y6P7 765 aaPredicted RBP6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 TK1P04183 234 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 EBLN1P0CF75 366 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 ENGP17813 658 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 EEFSECP57772 596 aaKnown RBP6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 DNASE1L3Q13609 305 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZNF804AQ7Z570 1209 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 SFTPA1Q8IWL2 248 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 GOLGA1Q92805 767 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 REXO5Q96IC2 774 aaKnown RBP6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 FSD1LQ9BXM9 530 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 KRTAP9-2Q9BYQ4 174 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 KCNK9Q9NPC2 374 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 G6PC2Q9NQR9 355 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 TMLHEQ9NVH6 421 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZNF69Q9UC07 566 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 ADAMTS5Q9UNA0 930 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 LZTS1Q9Y250 596 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 ZBTB1Q9Y2K1 713 aa6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 EPN1Q9Y6I3 576 aaPredicted RBP6.16□□□□□ -1.42
CKS1BP1-201ENST00000555221 LINC00473A8K010 186 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 E7EVH7 732 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 NPIPB8E9PQR5 432 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 JUPP14923 745 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 THBS4P35443 961 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 AARS2Q5JTZ9 985 aaKnown RBP6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 TMEM63BQ5T3F8 832 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 VRK3Q8IV63 474 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 HERC6Q8IVU3 1022 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 TMEM57Q8N5G2 664 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 RIC8AQ9NPQ8 531 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 RASSF1Q9NS23 344 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 PDP2Q9P2J9 529 aa6.15□□□□□ -1.42
CKS1BP1-201ENST00000555221 COL4A3Q01955 1670 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 LOC105369274A0A096LPK9 316 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 LOC102723532A0A0G2JNH3 316 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 GRID2IPA4D2P6 1211 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 TMEM191CA6NGB0 347 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 H0YIZ8 118 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 CA12O43570 354 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 TFRCP02786 760 aaKnown RBP6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 FAM163BP0C2L3 166 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 TMIGD3P0DMS9 266 aaPredicted RBP6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 MATN1P21941 496 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 ADRA1BP35368 520 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 DIO1P49895 249 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 DEUP1Q05D60 604 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 ABHD18Q0P651 414 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 CCDC15Q0P6D6 951 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 ZNF169Q14929 603 aaPredicted RBP6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 SMAD1Q15797 465 aaKnown RBP6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 FAM110CQ1W6H9 321 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 AAK1Q2M2I8 961 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 L1TD1Q5T7N2 865 aaKnown RBP6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 DGAT2L7PQ6IED9 249 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 LVRNQ6Q4G3 990 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 LRRTM4Q86VH4 590 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 ULK2Q8IYT8 1036 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 OR4N4Q8N0Y3 316 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 FAM71DQ8N9W8 422 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 CSGALNACT1Q8TDX6 532 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 RILPL2Q969X0 211 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 MCRS1Q96EZ8 462 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 PDLIM2Q96JY6 352 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 LENG8Q96PV6 779 aaPredicted RBP6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 BAG5Q9UL15 447 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 MYRFQ9Y2G1 1151 aa6.14□□□□□ -1.43
CKS1BP1-201ENST00000555221 CCDC187A0A096LP49 1063 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 SLC38A8A6NNN8 435 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 B8ZZF3 427 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 NKX2-8O15522 239 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 WDHD1O75717 1129 aaPredicted RBP6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 KRT38O76015 456 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 CD53P19397 219 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 IGHMBP2P38935 993 aaKnown RBP6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 CCT8P50990 548 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 RBM6P78332 1123 aaKnown RBP6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 FOXI1Q12951 378 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 FAM187BQ17R55 369 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 FAM153CQ494X1 144 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 GALNTL6Q49A17 601 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 PCID2Q5JVF3 399 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 HECTD2Q5U5R9 776 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 ANKRD40Q6AI12 368 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 ANKS1BQ7Z6G8 1248 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 GRASPQ7Z6J2 395 aaPredicted RBP6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 TEX19Q8NA77 164 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 BEND2Q8NDZ0 799 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 IL17REQ8NFR9 667 aa6.13□□□□□ -1.43
CKS1BP1-201ENST00000555221 OR52L2PQ8NGH6 319 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms