RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.11□□□□□ -1.75
KTN1-220ENST00000555172 FBXO18Q8NFZ0 1043 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.11□□□□□ -1.75
KTN1-220ENST00000555172 IGDCC4Q8TDY8 1250 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SLC22A17Q8WUG5 538 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 FAM167AQ96KS9 214 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 FER1L6-AS2Q96M78 137 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 CCDC43Q96MW1 224 aaKnown RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 GBP5Q96PP8 586 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 CITED2Q99967 270 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 HTATIP2Q9BUP3 242 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 TNMDQ9H2S6 317 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 LDAHQ9H6V9 325 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 WDR26Q9H7D7 661 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 SLC39A2Q9NP94 309 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 NRIP3Q9NQ35 241 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 HEYLQ9NQ87 328 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 GALNT8Q9NY28 637 aa4.11□□□□□ -1.75
KTN1-220ENST00000555172 HECAQ9UBI9 543 aaPredicted RBP4.11□□□□□ -1.75
KTN1-220ENST00000555172 SYNJ2BP-COX16A0A087WUM0 186 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 RAB27BO00194 218 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 TP73O15350 636 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 SGTAO43765 313 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 ZBTB14O43829 449 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 PRPSAP2O60256 369 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 RASSF9O75901 435 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 KIF20AO95235 890 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 MATN4O95460 622 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 RPLP2P05387 115 aaKnown RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 TUBBP07437 444 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 CPT2P23786 658 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 NFKBIAP25963 317 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 MST1P26927 711 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 APEX1P27695 318 aaKnown RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 RFC1P35251 1148 aaPredicted RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 PPARGP37231 505 aaPredicted RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 GRM4Q14833 912 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 LRRC24Q50LG9 513 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 FAXCQ5TGI0 409 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 OTOAQ7RTW8 1153 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 ADGRG6Q86SQ4 1221 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 FAM90A1Q86YD7 464 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 RHOT2Q8IXI1 618 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 CDYL2Q8N8U2 506 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 TDRD5Q8NAT2 981 aaKnown RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 ZNF384Q8TF68 577 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 SCFD2Q8WU76 684 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 SHC3Q92529 594 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 MRPS27Q92552 414 aaKnown RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 SYAP1Q96A49 352 aaPredicted RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 C16orf45Q96MC5 204 aaPredicted RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 ATP6V0BQ99437 205 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 AGAP2Q99490 1192 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 PIP5K1AQ99755 562 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 MAK16Q9BXY0 300 aaKnown RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 KRT23Q9C075 422 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 TP63Q9H3D4 680 aaPredicted RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 SIRT5Q9NXA8 310 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 MRPL15Q9P015 296 aaKnown RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 FETUBQ9UGM5 382 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 CPSF3Q9UKF6 684 aaKnown RBP4.1□□□□□ -1.75
KTN1-220ENST00000555172 EXOC7Q9UPT5 735 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 MED16Q9Y2X0 877 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 C2CD2Q9Y426 696 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 ANGPTL3Q9Y5C1 460 aa4.1□□□□□ -1.75
KTN1-220ENST00000555172 TRAV34A0A0B4J273 112 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 ZNF839A8K0R7 811 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 F2RL2O00254 374 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 SCAMP1O15126 338 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 RIPK2O43353 540 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 TNFSF14O43557 240 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 OPHN1O60890 802 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 SEC22BO75396 215 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 PDE8BO95263 885 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 AMY1AP04745 511 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 TXNP10599 105 aaKnown RBP4.09□□□□□ -1.75
KTN1-220ENST00000555172 FERP16591 822 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 IL1R2P27930 398 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 VIPR1P32241 457 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 THBS2P35442 1172 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 MAGEA10P43363 369 aaPredicted RBP4.09□□□□□ -1.75
KTN1-220ENST00000555172 RABIFP47224 123 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 GPR15P49685 360 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 ALDH18A1P54886 795 aaKnown RBP4.09□□□□□ -1.75
KTN1-220ENST00000555172 SH3BGRP55822 239 aaPredicted RBP4.09□□□□□ -1.75
KTN1-220ENST00000555172 SLC26A5P58743 744 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 ZNF200P98182 395 aaPredicted RBP4.09□□□□□ -1.75
KTN1-220ENST00000555172 NFATC3Q12968 1075 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 KCNAB1Q14722 419 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 RTP5Q14D33 572 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 RPS6KA2Q15349 733 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 OASLQ15646 514 aaKnown RBP4.09□□□□□ -1.75
KTN1-220ENST00000555172 KBTBD12Q3ZCT8 623 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 SPATS1Q496A3 300 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 ZNF628Q5EBL2 1059 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 DEPDC1Q5TB30 811 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 ARL6IP4Q66PJ3 421 aaKnown RBP4.09□□□□□ -1.75
KTN1-220ENST00000555172 ADALQ6DHV7 355 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 ZCCHC12Q6PEW1 402 aa4.09□□□□□ -1.75
KTN1-220ENST00000555172 CD300LDQ6UXZ3 194 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms