RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 DUSP4Q13115 394 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 SGO2Q562F6 1265 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 MYLPFQ96A32 169 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 BCCIPQ9P287 314 aaKnown RBP eCLIP18.13■□□□□ 0.49
SHOX-204ENST00000554971 KIAA0754O94854 1291 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 GAS8O95995 478 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 CETN2P41208 172 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 PPP1R7Q15435 360 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 PLEKHA7Q6IQ23 1121 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 CEP128Q6ZU80 1094 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 RHOT1Q8IXI2 618 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 TCEAL8Q8IYN2 117 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 PABPC5Q96DU9 382 aaKnown RBP18.13■□□□□ 0.49
SHOX-204ENST00000554971 TMEM176AQ96HP8 235 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 TNIP3Q96KP6 325 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 FAM49BQ9NUQ9 324 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 CLDND1Q9NY35 253 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 ABI2Q9NYB9 513 aaPredicted RBP18.13■□□□□ 0.49
SHOX-204ENST00000554971 SLC27A5Q9Y2P5 690 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 PCDHB4Q9Y5E5 795 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 PATJQ8NI35 1801 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 BDP1A6H8Y1 2624 aa18.13■□□□□ 0.49
SHOX-204ENST00000554971 CLDN5O00501 218 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 SOAT2O75908 522 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 CCDC130P13994 396 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 RRM1P23921 792 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 CACNA2D1P54289 1103 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 PTK6Q13882 451 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 DCP1BQ8IZD4 617 aaKnown RBP18.12■□□□□ 0.49
SHOX-204ENST00000554971 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 TTC39CQ8N584 583 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 ATL2Q8NHH9 583 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 SLC7A14Q8TBB6 771 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 BTBD6Q96KE9 485 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 B3GNT5Q9BYG0 378 aa18.12■□□□□ 0.49
SHOX-204ENST00000554971 TRIM66O15016 1216 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 CYP2F1P24903 491 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 NOMO3P69849 1222 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 NFE2Q16621 373 aaPredicted RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 SYCE2Q6PIF2 218 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 TADA2BQ86TJ2 420 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 KATNAL2Q8IYT4 538 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 C12orf76Q8N812 135 aaPredicted RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 RBBP8NLQ8NC74 664 aaPredicted RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 MAFAQ8NHW3 353 aaPredicted RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 RNF25Q96BH1 459 aaPredicted RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 FOXP3Q9BZS1 431 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 ZNF518BQ9C0D4 1074 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 CYP4F11Q9HBI6 524 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 ADAM22Q9P0K1 906 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 CHORDC1Q9UHD1 332 aaPredicted RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 CDH22Q9UJ99 828 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 TTC28Q96AY4 2481 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 C5orf60A6NFR6 353 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 E7EVH7 732 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 LSM8O95777 96 aaKnown RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 C8AP07357 584 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 YWHAEP62258 255 aaKnown RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 LMNB2Q03252 620 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 SLC29A2Q14542 456 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 CCNG2Q16589 344 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 PPP1R26Q5T8A7 1209 aaPredicted RBP18.11■□□□□ 0.49
SHOX-204ENST00000554971 EXD1Q8NHP7 514 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 SLC2A14Q8TDB8 520 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 CPA5Q8WXQ8 436 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 TFAP2BQ92481 460 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 CYFIP2Q96F07 1278 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 MSLNLQ96KJ4 702 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 PARVAQ9NVD7 372 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 DOCK8Q8NF50 2099 aa18.11■□□□□ 0.49
SHOX-204ENST00000554971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.1■□□□□ 0.49
SHOX-204ENST00000554971 TCRBV7S2A1N4TA0A589 114 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 RGS16O15492 202 aaPredicted RBP18.1■□□□□ 0.49
SHOX-204ENST00000554971 RIPK2O43353 540 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 ATF6P18850 670 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 BDNFP23560 247 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 GNA15P30679 374 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 MMP13P45452 471 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 SMARCB1Q12824 385 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 TNFAIP8L3Q5GJ75 292 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 SPPL2BQ8TCT7 592 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 CASP10Q92851 521 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 SNF8Q96H20 258 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 PRDM6Q9NQX0 595 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 PCDHB5Q9Y5E4 795 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 INSL5Q9Y5Q6 135 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 DENND4CQ5VZ89 1909 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 THAP12O43422 761 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 PAPLNO95428 1278 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 GPR15P49685 360 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 MAMLD1Q13495 774 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 MAPRE1Q15691 268 aaKnown RBP18.1■□□□□ 0.49
SHOX-204ENST00000554971 LRRC38Q5VT99 294 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 ANKRD54Q6NXT1 300 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 CCHCR1Q8TD31 782 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 C2orf15Q8WU43 125 aaKnown RBP18.1■□□□□ 0.49
SHOX-204ENST00000554971 P3H4Q92791 437 aa18.1■□□□□ 0.49
SHOX-204ENST00000554971 ZNF707Q96C28 371 aaPredicted RBP18.1■□□□□ 0.49
SHOX-204ENST00000554971 FUBP3Q96I24 572 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHOX-204ENST00000554971 HEXIM2Q96MH2 286 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms