RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 EPM2AIP1Q7L775 607 aaPredicted RBP13.98□□□□□ -0.17
TUBB3-207ENST00000554927 CACUL1Q86Y37 369 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 CCDC47Q96A33 483 aaKnown RBP13.98□□□□□ -0.17
TUBB3-207ENST00000554927 CCDC127Q96BQ5 260 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 MED10Q9BTT4 135 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 SLC39A2Q9NP94 309 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 ITM2CQ9NQX7 267 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 EXOC1Q9NV70 894 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 GMIPQ9P107 970 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 USP25Q9UHP3 1055 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 LSM7Q9UK45 103 aaKnown RBP13.98□□□□□ -0.17
TUBB3-207ENST00000554927 ATP6V1DQ9Y5K8 247 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 STON1Q9Y6Q2 735 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 PTPRBP23467 1997 aa13.98□□□□□ -0.17
TUBB3-207ENST00000554927 ATP8B3O60423 1300 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 METTL12A8MUP2 240 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 A8MXQ7 604 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 PLK4O00444 970 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 SYNCRIPO60506 623 aaKnown RBP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 EXOC3O60645 756 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 PHACTR2O75167 634 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 DKK1O94907 266 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 CLSTN1O94985 981 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 OXTRP30559 389 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 CSNK1EP49674 416 aaKnown RBP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 TPMTP51580 245 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 SLC5A3P53794 718 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 TNNC1P63316 161 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 KRT85P78386 507 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 PSMD6Q15008 389 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 SMAD1Q15797 465 aaKnown RBP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 KNOP1Q1ED39 458 aaKnown RBP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 DHRS13Q6UX07 377 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 TRAPPC11Q7Z392 1133 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 METTL3Q86U44 580 aaKnown RBP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 FAM124AQ86V42 546 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 NXPE2Q96DL1 559 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 SIPA1Q96FS4 1042 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 SPATA32Q96LK8 384 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 KCNK16Q96T55 309 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 B3GNT5Q9BYG0 378 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 USP36Q9P275 1121 aaKnown RBP13.97□□□□□ -0.17
TUBB3-207ENST00000554927 RAI2Q9Y5P3 530 aa13.97□□□□□ -0.17
TUBB3-207ENST00000554927 ZNF462Q96JM2 2506 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 KCNJ18B7U540 433 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 CAPN9O14815 690 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 TGFB1I1O43294 461 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 TACC1O75410 805 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 KIF20AO95235 890 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 MYL1P05976 194 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 FAM163BP0C2L3 166 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 HOXD13P35453 343 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 GRK6P43250 576 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 TUBP50607 506 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 AFF3P51826 1226 aaKnown RBP13.96□□□□□ -0.17
TUBB3-207ENST00000554927 AP3M2P53677 418 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 SEMG2Q02383 582 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 GOLGA8FQ08AF8 430 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 GOLGA8DPQ0D2H9 430 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 CUL4BQ13620 913 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 TEAD4Q15561 434 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 KIF19Q2TAC6 998 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 DBX2Q6ZNG2 339 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 HTR3DQ70Z44 454 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 TMPRSS6Q8IU80 811 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 FCRL3Q96P31 734 aaPredicted RBP13.96□□□□□ -0.17
TUBB3-207ENST00000554927 CGRRF1Q99675 332 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 DUSP9Q99956 384 aaKnown RBP13.96□□□□□ -0.17
TUBB3-207ENST00000554927 NUP58Q9BVL2 599 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 MKRN2Q9H000 416 aaKnown RBP13.96□□□□□ -0.17
TUBB3-207ENST00000554927 SERTAD1Q9UHV2 236 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 NME7Q9Y5B8 376 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 SNX11Q9Y5W9 270 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 AK5Q9Y6K8 562 aa13.96□□□□□ -0.17
TUBB3-207ENST00000554927 GOLGA4Q13439 2230 aaKnown RBP13.96□□□□□ -0.17
TUBB3-207ENST00000554927 TENM4Q6N022 2769 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 E9PAM4 449 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 RRP8O43159 456 aaKnown RBP13.95□□□□□ -0.18
TUBB3-207ENST00000554927 TLR5O60602 858 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 JUPP14923 745 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 CMA1P23946 247 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 CASP1P29466 404 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 CYP24A1Q07973 514 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 BMT2Q1RMZ1 405 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 INAVAQ3KP66 663 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 WDR72Q3MJ13 1102 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 C6orf118Q5T5N4 469 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 SNX30Q5VWJ9 437 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 C12orf56Q8IXR9 622 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 ZNF843Q8N446 348 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 SYAP1Q96A49 352 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-207ENST00000554927 CCDC34Q96HJ3 373 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 PRORYQ9H606 182 aa13.95□□□□□ -0.18
TUBB3-207ENST00000554927 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-207ENST00000554927 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms