RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 JDP2Q8WYK2 163 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 EFHD2Q96C19 240 aaPredicted RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 CTDP1Q9Y5B0 961 aaPredicted RBP16.18■□□□□ 0.18
SYNE3-203ENST00000554873 NOX1Q9Y5S8 564 aa16.18■□□□□ 0.18
SYNE3-203ENST00000554873 ZNF536O15090 1300 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 PABPC1P11940 636 aaKnown RBP16.17■□□□□ 0.18
SYNE3-203ENST00000554873 TKTP29401 623 aaKnown RBP16.17■□□□□ 0.18
SYNE3-203ENST00000554873 COPAP53621 1224 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 SOX10P56693 466 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 MTMR1Q13613 665 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 PDE1CQ14123 709 aaPredicted RBP16.17■□□□□ 0.18
SYNE3-203ENST00000554873 BSNDQ8WZ55 320 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 POMGNT1Q8WZA1 660 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 LRGUKQ96M69 825 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 ACAP3Q96P50 834 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 SLC2A11Q9BYW1 496 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 TIMM22Q9Y584 194 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 CLRN2A0PK11 232 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 FAM47E-STBD1D6RA91 191 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 CFHP08603 1231 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 TCF7P36402 384 aaPredicted RBP16.17■□□□□ 0.18
SYNE3-203ENST00000554873 CCT8P50990 548 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 MORF4L2Q15014 288 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 SDR16C5Q8N3Y7 309 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 ADCY4Q8NFM4 1077 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 CLEC4DQ8WXI8 215 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 CLIP3Q96DZ5 547 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 OSBPL10Q9BXB5 764 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 VPS45Q9NRW7 570 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 PCDHB2Q9Y5E7 798 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 LTBP4Q8N2S1 1624 aa16.17■□□□□ 0.18
SYNE3-203ENST00000554873 MCF2LO15068 1137 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 NSFP46459 744 aaKnown RBP16.16■□□□□ 0.18
SYNE3-203ENST00000554873 ATP1A4Q13733 1029 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 CYTH1Q15438 398 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 NDUFA5Q16718 116 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 AOC3Q16853 763 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 SPOPLQ6IQ16 392 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 C16orf87Q6PH81 154 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 TICAM1Q8IUC6 712 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 NLGN1Q8N2Q7 840 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 GLIS1Q8NBF1 620 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 DCAKDQ8WVC6 231 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 ZNF516Q92618 1163 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 UNKQ9C0B0 810 aaKnown RBP16.16■□□□□ 0.18
SYNE3-203ENST00000554873 PARVBQ9HBI1 364 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 PALMDQ9NP74 551 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 PROCP04070 461 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 ICAM1P05362 532 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 CD58P19256 250 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 PTGER2P43116 358 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 PSMC5P62195 406 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 DMP1Q13316 513 aaPredicted RBP16.16■□□□□ 0.18
SYNE3-203ENST00000554873 TFDP1Q14186 410 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 IL23RQ5VWK5 629 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 ATG16L1Q676U5 607 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 NANOGP8Q6NSW7 305 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 MON1BQ7L1V2 547 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 ENOSF1Q7L5Y1 443 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 RHOT1Q8IXI2 618 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 FBXW8Q8N3Y1 598 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 GSDMBQ8TAX9 411 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 CCDC68Q9H2F9 335 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 ACSS3Q9H6R3 686 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 KMT5AQ9NQR1 393 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 TBC1D22BQ9NU19 505 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 GNPTGQ9UJJ9 305 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 CDH7Q9ULB5 785 aa16.16■□□□□ 0.18
SYNE3-203ENST00000554873 SDR42E2A6NKP2 422 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 ZNF701M0R085 212 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-203ENST00000554873 CCNE2O96020 404 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 DSG3P32926 999 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 GJC1P36383 396 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 CAP2P40123 477 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 SLC18A2Q05940 514 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 PDK1Q15118 436 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 TCHHL1Q5QJ38 904 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-203ENST00000554873 OGFOD2Q6N063 350 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 GPR180Q86V85 440 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 HPS6Q86YV9 775 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 TRIM11Q96F44 468 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 INO80BQ9C086 356 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-203ENST00000554873 DKK3Q9UBP4 350 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 USTQ9Y2C2 406 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 CLUHO75153 1309 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 A0A1B0GTW7 788 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 PSTPIP1O43586 416 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 PTPN2P17706 415 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 SSTR3P32745 418 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-203ENST00000554873 BST1Q10588 318 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 ADGRE1Q14246 886 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 LMBRD2Q68DH5 695 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-203ENST00000554873 ANKMY2Q8IV38 441 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 KATNAL2Q8IYT4 538 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 THAP11Q96EK4 314 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 C11orf70Q9BRQ4 267 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 FAM213AQ9BRX8 229 aa16.15■□□□□ 0.18
SYNE3-203ENST00000554873 MAN1C1Q9NR34 630 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms