RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 VOPP1Q96AW1 172 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 HIC2Q96JB3 615 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 C5orf34Q96MH7 638 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 EIF3CQ99613 913 aaKnown RBP4.67□□□□□ -1.66
SCFD1-214ENST00000554819 ADGRE3Q9BY15 652 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 SPATA31A1Q5TZJ5 1347 aa4.67□□□□□ -1.66
SCFD1-214ENST00000554819 CGB1A6NKQ9 187 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 FYB1O15117 783 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 SETSIPP0DME0 302 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 ATF7P17544 494 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-214ENST00000554819 DRD1P21728 446 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 EPHB2P29323 1055 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 MPGP29372 298 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 PPM1AP35813 382 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 JAK3P52333 1124 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 BFSP2Q13515 415 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 STARD3Q14849 445 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 MIS18BP1Q6P0N0 1132 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 ZNF66Q6ZN08 573 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 MORC1Q86VD1 984 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 CLASRPQ8N2M8 674 aaKnown RBP4.66□□□□□ -1.66
SCFD1-214ENST00000554819 GALNT16Q8N428 558 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 MUL1Q969V5 352 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 TMEM41AQ96HV5 264 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 NRIP3Q9NQ35 241 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 VPS45Q9NRW7 570 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 SLC39A10Q9ULF5 831 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 LRCH1Q9Y2L9 728 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 DTNAQ9Y4J8 743 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 WDR17Q8IZU2 1322 aa4.66□□□□□ -1.66
SCFD1-214ENST00000554819 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-214ENST00000554819 TTC34A8MYJ7 566 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 DSCR3O14972 297 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 PRAMEF2O60811 474 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 NTSR2O95665 410 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 CDK4P11802 303 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 MATN1P21941 496 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 KELP23276 732 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 DUSP1P28562 367 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 GALNSP34059 522 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 IGHMBP2P38935 993 aaKnown RBP4.65□□□□□ -1.67
SCFD1-214ENST00000554819 ABCG1P45844 678 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 CSHL1Q14406 222 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 PFKFB3Q16875 520 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-214ENST00000554819 P3H1Q32P28 736 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 CEP78Q5JTW2 689 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 CC2D1BQ5T0F9 858 aaKnown RBP4.65□□□□□ -1.67
SCFD1-214ENST00000554819 FAM90A2PQ658T7 463 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 CCDC144NLQ6NUI1 221 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 NEK8Q86SG6 692 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 SKAP1Q86WV1 359 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 SAMD3Q8N6K7 520 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 ZNF398Q8TD17 642 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 KAZALD1Q96I82 304 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 FAM118BQ9BPY3 351 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 SAP30LQ9HAJ7 183 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 TMEM8AQ9HCN3 771 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 SEMA5BQ9P283 1151 aa4.65□□□□□ -1.67
SCFD1-214ENST00000554819 MAGED2Q9UNF1 606 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-214ENST00000554819 PNMA6EA0A0J9YXQ4 647 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 GOLGA6L3A6NEY3 463 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 FFAR2O15552 330 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 SLC3A2P08195 630 aaKnown RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 PRR35P0CG20 571 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 WDR5P61964 334 aaKnown RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 ZNF268Q14587 947 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 TRIM71Q2Q1W2 868 aaKnown RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 SLC18B1Q6NT16 456 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 XRRA1Q6P2D8 792 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 PGBD2Q6P3X8 592 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 KRT27Q7Z3Y8 459 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 YTHDF3Q7Z739 585 aaKnown RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 OSR1Q8TAX0 266 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 PNISRQ8TF01 805 aaKnown RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 PRR11Q96HE9 360 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 EFHD1Q9BUP0 239 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 TTLL2Q9BWV7 592 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 RNF26Q9BY78 433 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-214ENST00000554819 VPS4AQ9UN37 437 aa4.64□□□□□ -1.67
SCFD1-214ENST00000554819 CYP2D7A0A087X1C5 515 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 J3KTA2 159 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 CTIFO43310 598 aaKnown RBP4.63□□□□□ -1.67
SCFD1-214ENST00000554819 MBPP02686 304 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-214ENST00000554819 TACR3P29371 465 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 SERPINB3P29508 390 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 ALDH18A1P54886 795 aaKnown RBP4.63□□□□□ -1.67
SCFD1-214ENST00000554819 SLC14A1Q13336 389 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 CBFBQ13951 182 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 CNGA3Q16281 694 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 FAM110CQ1W6H9 321 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 MTX3Q5HYI7 312 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 MEX3CQ5U5Q3 659 aaKnown RBP4.63□□□□□ -1.67
SCFD1-214ENST00000554819 ZKSCAN2Q63HK3 967 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 ANO7Q6IWH7 933 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 ACSM6Q6P461 480 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 ZNF527Q8NB42 609 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 OR52L2PQ8NGH6 319 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 WDR60Q8WVS4 1066 aa4.63□□□□□ -1.67
SCFD1-214ENST00000554819 PRPF18Q99633 342 aaKnown RBP4.63□□□□□ -1.67
SCFD1-214ENST00000554819 QTRT1Q9BXR0 403 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms