RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MICAL2O94851 1124 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 F2P00734 622 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ABCB4P21439 1286 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PRPH2P23942 346 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 STX2P32856 288 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 RPA3P35244 121 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 FDFT1P37268 417 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GCLCP48506 637 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MTTPP55157 894 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 RPL7AP62424 266 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 FSTL1Q12841 308 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GNASQ5JWF2 1037 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TSTD2Q5T7W7 516 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TTC39BQ5VTQ0 682 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DCAF15Q66K64 600 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SDCCAG8Q86SQ7 713 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 NUP93Q8N1F7 819 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM102Q8N9M5 508 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ATP11CQ8NB49 1132 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PCDH19Q8TAB3 1148 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PPP1R14BQ96C90 147 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 THOC1Q96FV9 657 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SIGLEC11Q96RL6 698 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TWNKQ96RR1 684 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CPXM1Q96SM3 734 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 EBNA1BP2Q99848 306 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 NAT9Q9BTE0 207 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SLC13A1Q9BZW2 595 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 C20orf27Q9GZN8 174 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ZHX3Q9H4I2 956 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CXorf56Q9H5V9 222 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SYNCQ9H7C4 482 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ECT2Q9H8V3 914 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GPRC5CQ9NQ84 441 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 FBXO28Q9NVF7 368 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TUBA8Q9NY65 449 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PAK5Q9P286 719 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 RBPJLQ9UBG7 517 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SNX24Q9Y343 169 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 HBS1LQ9Y450 684 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 FAM237BA0A1B0GVD1 139 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TCRBV9S1A1TA0A576 114 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TCRBV3S1A0A5B6 114 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 KCNU1A8MYU2 1149 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 E5RJQ4 531 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 I6L893 689 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DLGAP1O14490 977 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 XPO1O14980 1071 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 C1RP00736 705 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 VAV1P15498 845 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ZFXP17010 805 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CYP2B6P20813 491 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MARK3P27448 753 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GNA15P30679 374 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MAPK4P31152 587 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ADARP55265 1226 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DEUP1Q05D60 604 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 IFT88Q13099 833 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 NCOA4Q13772 614 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CCNIQ14094 377 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MRPL58Q14197 206 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GBX1Q14549 363 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 FASTKD3Q14CZ7 662 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SGO2Q562F6 1265 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 LIN9Q5TKA1 542 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TTC30AQ86WT1 665 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 LSMEM2Q8N112 164 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD13CQ8N6S4 541 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MDM1Q8TC05 714 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TRPC4APQ8TEL6 797 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 FAM172AQ8WUF8 416 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM176AQ96HP8 235 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 C1orf74Q96LT6 269 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 RTP3Q9BQQ7 232 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MIS12Q9H081 205 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ASCC2Q9H1I8 757 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ZFYVE28Q9HCC9 887 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CREBZFQ9NS37 354 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 RNF146Q9NTX7 359 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ETNK2Q9NVF9 386 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PPP1R1BQ9UD71 204 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PRPF19Q9UMS4 504 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PCDHB12Q9Y5F1 795 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 AP1M2Q9Y6Q5 423 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 KLHL33A6NCF5 533 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 IGF2BP3O00425 579 aaKnown RBP eCLIP3.57□□□□□ -1.846e-6■■■□□ 17.4
SEC23A-207ENST00000554615 TNFRSF10BO14763 440 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 RGS16O15492 202 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 SLC7A4O43246 635 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 HBP1O60381 514 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ALDOAP04075 364 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ZDHHC11BP0C7U3 371 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 DLATP10515 647 aaKnown RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 ATF2P15336 505 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 DPEP1P16444 411 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 PCSK2P16519 638 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 JUNBP17275 347 aaPredicted RBP3.57□□□□□ -1.84
SEC23A-207ENST00000554615 KRT15P19012 456 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 CYP2C18P33260 490 aa3.57□□□□□ -1.84
SEC23A-207ENST00000554615 GJA5P36382 358 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms