RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TULP3O75386 442 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 TPM2P07951 284 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 CORO1AP31146 461 aaKnown RBP13.66□□□□□ -0.22
SHMT2-211ENST00000554310 USP8P40818 1118 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 GRIA2P42262 883 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 MYL5Q02045 173 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 KDSRQ06136 332 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 MSANTD2Q6P1R3 559 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 SARM1Q6SZW1 724 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 SYT13Q7L8C5 426 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 LONP2Q86WA8 852 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 TMEM25Q86YD3 366 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 PHTF2Q8N3S3 785 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 USP33Q8TEY7 942 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 NDRG1Q92597 394 aaKnown RBP13.66□□□□□ -0.22
SHMT2-211ENST00000554310 EDEM1Q92611 657 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 TRIM62Q9BVG3 475 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 BBS2Q9BXC9 721 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 WDR35Q9P2L0 1181 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 DNAJC12Q9UKB3 198 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 SPTBN4Q9H254 2564 aa13.66□□□□□ -0.22
SHMT2-211ENST00000554310 A0A0A0MRY4 1105 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 SLC12A8A0AV02 714 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 NEDD8-MDP1E9PL57 170 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 GOLGA6L19H0YKK7 550 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 K7EQS6 105 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 GABBR2O75899 941 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 LTFP02788 710 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 KLKB1P03952 638 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 TPM3P06753 285 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 TYRP14679 529 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 CNR2P34972 360 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 CHKAP35790 457 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 SLC6A11P48066 632 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 FNTBP49356 437 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 MRPS21P82921 87 aaKnown RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 PTK2Q05397 1052 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 KRT31Q15323 416 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 TRIP4Q15650 581 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 HSF5Q4G112 596 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 DENND1BQ6P3S1 775 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 NUDT18Q6ZVK8 323 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 CAMKK1Q8N5S9 505 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 TERB1Q8NA31 727 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 SUMF1Q8NBK3 374 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 ANKRD20A12PQ8NF67 263 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 ACP6Q9NPH0 428 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 ST7Q9NRC1 585 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 TAB2Q9NYJ8 693 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 AJAP1Q9UKB5 411 aaPredicted RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 SMG5Q9UPR3 1016 aaKnown RBP13.65□□□□□ -0.22
SHMT2-211ENST00000554310 ZKSCAN5Q9Y2L8 839 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 SPAG17Q6Q759 2223 aa13.65□□□□□ -0.22
SHMT2-211ENST00000554310 PIK3R2O00459 728 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 LATS1O95835 1130 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 PENKP01210 267 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-211ENST00000554310 HMBSP08397 361 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
SHMT2-211ENST00000554310 TNFRSF4P43489 277 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 HARS2P49590 506 aaKnown RBP13.64□□□□□ -0.23
SHMT2-211ENST00000554310 SEC13P55735 322 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 BPIFB4P59827 614 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 DMWDQ09019 674 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 MESP2Q0VG99 397 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 PDCLQ13371 301 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 RAPGEF1Q13905 1077 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 DMC1Q14565 340 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 FKBP15Q5T1M5 1219 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 GRAMD4Q6IC98 578 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 DPY19L2P1Q6NXN4 242 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 TPGS1Q6ZTW0 290 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 BEND5Q7L4P6 421 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 WDR5BQ86VZ2 330 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 DHX40Q8IX18 779 aaKnown RBP13.64□□□□□ -0.23
SHMT2-211ENST00000554310 FAM217AQ8IXS0 508 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 FAM71AQ8IYT1 594 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 CPXM2Q8N436 756 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
SHMT2-211ENST00000554310 MIS12Q9H081 205 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 DNAJC17Q9NVM6 304 aaKnown RBP13.64□□□□□ -0.23
SHMT2-211ENST00000554310 FANCLQ9NW38 375 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 AGO1Q9UL18 857 aaKnown RBP13.64□□□□□ -0.23
SHMT2-211ENST00000554310 PCDHGC3Q9UN70 934 aa13.64□□□□□ -0.23
SHMT2-211ENST00000554310 CEP250Q9BV73 2442 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 E5RJQ4 531 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 FOXN3O00409 490 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-211ENST00000554310 MSI1O43347 362 aaKnown RBP13.63□□□□□ -0.23
SHMT2-211ENST00000554310 APBB3O95704 486 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 CYBBP04839 570 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 CHRM1P11229 460 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-211ENST00000554310 UCHL3P15374 230 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 CDC25BP30305 580 aa13.63□□□□□ -0.23
SHMT2-211ENST00000554310 KIR2DL1P43626 348 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms