RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 KIZQ2M2Z5 673 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 TRNP1Q6NT89 227 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 DRICH1Q6PGQ1 229 aaPredicted RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 C12orf29Q8N999 325 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 EMID1Q96A84 441 aaPredicted RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 PPP1R14BQ96C90 147 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 RBM15Q96T37 977 aaKnown RBP eCLIP9.36□□□□□ -0.915e-8■□□□□ 9
AL049839.2-201ENST00000553947 VRTNQ9H8Y1 702 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 SLCO1B3Q9NPD5 702 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 DPP3Q9NY33 737 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 STX18Q9P2W9 335 aaKnown RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 ZNF212Q9UDV6 495 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 GINS2Q9Y248 185 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 CENPFP49454 3210 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 TAC1P20366 129 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 RGS2P41220 211 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 GAD2Q05329 585 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 DCTN2Q13561 401 aaKnown RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 CYP4F22Q6NT55 531 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 TMEM53Q6P2H8 277 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 PPP1R21Q6ZMI0 780 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 GPR142Q7Z601 462 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 MTDHQ86UE4 582 aaKnown RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 ZCCHC9Q8N567 271 aaKnown RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 SLC35B2Q8TB61 432 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 SERPINB12Q96P63 405 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 CADM1Q9BY67 442 aaKnown RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 KRT82Q9NSB4 513 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 SETD4Q9NVD3 440 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 DDX56Q9NY93 547 aaKnown RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 RPL26L1Q9UNX3 145 aaKnown RBP9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 NME7Q9Y5B8 376 aa9.36□□□□□ -0.91
AL049839.2-201ENST00000553947 CST8O60676 142 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 BANF1O75531 89 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 IFNB1P01574 187 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 MMP3P08254 477 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 PABPC4LP0CB38 370 aaKnown RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 KDELR1P24390 212 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 MAGEA4P43358 317 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 OTUD4Q01804 1114 aaKnown RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 PLCB3Q01970 1234 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 POLNQ7Z5Q5 900 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 DPP9Q86TI2 863 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 CFAP61Q8NHU2 1237 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 NPLOC4Q8TAT6 608 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 ACTL9Q8TC94 416 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 SPOCK2Q92563 424 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 HSPBAP1Q96EW2 488 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 MCRS1Q96EZ8 462 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 MAML3Q96JK9 1138 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 ZMAT2Q96NC0 199 aaKnown RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 ACAP3Q96P50 834 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 CCDC28BQ9BUN5 200 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 SAYSD1Q9NPB0 183 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 UBN1Q9NPG3 1134 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 DCTN4Q9UJW0 460 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 DRG1Q9Y295 367 aaKnown RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 HES2Q9Y543 173 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 COL1A2P08123 1366 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 GLTPD2A6NH11 291 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 PFKMP08237 780 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 VARSP26640 1264 aaKnown RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 MIPP30301 263 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 HOXA11P31270 313 aaPredicted RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 ATICP31939 592 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 FOXN2P32314 431 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 GABRB2P47870 512 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 NRLP54845 237 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 SULT2A1Q06520 285 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 MED21Q13503 144 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 PRAMEF19Q5SWL8 479 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 B3GNT6Q6ZMB0 384 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 RASSF3Q86WH2 238 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 TAB3Q8N5C8 712 aaPredicted RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 BBOF1Q8ND07 529 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 NKD2Q969F2 451 aaPredicted RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 KIF12Q96FN5 646 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 PEBP4Q96S96 227 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 LPIN3Q9BQK8 851 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 FAM49AQ9H0Q0 323 aaPredicted RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 GJD2Q9UKL4 321 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 TSC22D4Q9Y3Q8 395 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 SGK1O00141 431 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 SPAG7O75391 227 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 GRAP2O75791 330 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 ITGAVP06756 1048 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 VDRP11473 427 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 NAT1P18440 290 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 PHEXP78562 749 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 LMNB2Q03252 620 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 DUSP28Q4G0W2 176 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 C6orf163Q5TEZ5 329 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 CAPN12Q6ZSI9 719 aa9.35□□□□□ -0.91
AL049839.2-201ENST00000553947 RELL1Q8IUW5 271 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms