RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 WBP1Q96G27 269 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 ACCSQ96QU6 501 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 KIF2CQ99661 725 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 NUP58Q9BVL2 599 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 ZHX3Q9H4I2 956 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 SSUH2Q9Y2M2 353 aa9.59□□□□□ -0.87
PRKCH-208ENST00000553846 COL27A1Q8IZC6 1860 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 USP9XQ93008 2570 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 A0A1B0GTQ1 180 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 NPC1O15118 1278 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 TSPAN3O60637 253 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 BEST1O76090 585 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 LDHAP00338 332 aaKnown RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 KLKB1P03952 638 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 HOXD13P35453 343 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 SEMG2Q02383 582 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 IFRD2Q12894 506 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 TARDBPQ13148 414 aaKnown RBP eCLIP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 ORC1Q13415 861 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 CAMK2GQ13555 558 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 ZNF234Q14588 700 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 STARD3Q14849 445 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 SUZ12Q15022 739 aaKnown RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 KLHDC10Q6PID8 442 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 TPGS1Q6ZTW0 290 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 USP49Q70CQ1 688 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 HS2ST1Q7LGA3 356 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 WDR49Q8IV35 697 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 FUKQ8N0W3 1084 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 CACTIN-AS1Q8N1I8 211 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 SNRNP27Q8WVK2 155 aaKnown RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 RFFLQ8WZ73 363 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 TTC9Q92623 222 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 BIRC7Q96CA5 298 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 SIPA1Q96FS4 1042 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 ANKRD36BP1Q96IX9 119 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 XPO6Q96QU8 1125 aaKnown RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 SMOQ99835 787 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 CLMPQ9H6B4 373 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 CSNK1G1Q9HCP0 422 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 DMAP1Q9NPF5 467 aaPredicted RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 COMMD8Q9NX08 183 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 FTSJ1Q9UET6 329 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 CLEC4EQ9ULY5 219 aa9.58□□□□□ -0.88
PRKCH-208ENST00000553846 SPENQ96T58 3664 aaKnown RBP9.58□□□□□ -0.88
PRKCH-208ENST00000553846 CAPN8A6NHC0 703 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 HHLA1C9JL84 531 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 ENC1O14682 589 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 ARHGAP6O43182 974 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 BRINP1O60477 761 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 STC2O76061 302 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 KRT18P05783 430 aaKnown RBP9.57□□□□□ -0.88
PRKCH-208ENST00000553846 IGHV4-34P06331 123 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 C1SP09871 688 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 UBA7P41226 1012 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 IL9RQ01113 521 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 DNAJC3Q13217 504 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 SF3A1Q15459 793 aaKnown RBP9.57□□□□□ -0.88
PRKCH-208ENST00000553846 DUOXA2Q1HG44 320 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 TBC1D25Q3MII6 688 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 PKDCCQ504Y2 493 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 HES3Q5TGS1 186 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 GPRIN1Q7Z2K8 1008 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 KANSL1Q7Z3B3 1105 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 FMNL3Q8IVF7 1028 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 GPD1LQ8N335 351 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 SAP25Q8TEE9 199 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 PRCCQ92733 491 aaPredicted RBP9.57□□□□□ -0.88
PRKCH-208ENST00000553846 CALML4Q96GE6 196 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 HIC2Q96JB3 615 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 TMEM245Q9H330 911 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 PCIF1Q9H4Z3 704 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 MRPL44Q9H9J2 332 aaKnown RBP9.57□□□□□ -0.88
PRKCH-208ENST00000553846 NMUR1Q9HB89 426 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 PLK2Q9NYY3 685 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 EXOC7Q9UPT5 735 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 DOPEY2Q9Y3R5 2298 aa9.57□□□□□ -0.88
PRKCH-208ENST00000553846 PYCARD-AS1I3L0S3 204 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 CAPN9O14815 690 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 VILLO15195 856 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 RRP8O43159 456 aaKnown RBP9.56□□□□□ -0.88
PRKCH-208ENST00000553846 RFPL3O75679 317 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 WNT1P04628 370 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 GAP43P17677 238 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 CD27P26842 260 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 HNF1BP35680 557 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 LONP1P36776 959 aaKnown RBP9.56□□□□□ -0.88
PRKCH-208ENST00000553846 EIF4HQ15056 248 aaKnown RBP9.56□□□□□ -0.88
PRKCH-208ENST00000553846 CCDC157Q569K6 752 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 SFMBT2Q5VUG0 894 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 LRRC69Q6ZNQ3 347 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 CACUL1Q86Y37 369 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 FAM217AQ8IXS0 508 aa9.56□□□□□ -0.88
PRKCH-208ENST00000553846 DCBLD1Q8N8Z6 715 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms