RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TRIM24O15164 1050 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PIK3C2GO75747 1445 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ECDO95905 644 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 FDFT1P37268 417 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ACADSBP45954 432 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 HLFQ16534 295 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 TTC27Q6P3X3 843 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PAOXQ6QHF9 649 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PIGWQ7Z7B1 504 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ITIH5Q86UX2 942 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 TMPRSS6Q8IU80 811 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM109AQ8N4B1 249 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 C18orf8Q96DM3 657 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 VCPIP1Q96JH7 1222 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CEP170P1Q96L14 293 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PWWP2AQ96N64 755 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 DHRS9Q9BPW9 319 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 LPIN3Q9BQK8 851 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 GCOM2Q9BZD3 368 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 WWP1Q9H0M0 922 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 TRIT1Q9H3H1 467 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 KLHL31Q9H511 634 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CACNA2D2Q9NY47 1150 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 NXF1Q9UBU9 619 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 TBX1O43435 398 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CCND2P30279 289 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 DGCR6Q14129 220 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 DHX34Q14147 1143 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 LIN9Q5TKA1 542 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF852Q6ZMS4 543 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PI4K2BQ8TCG2 481 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 C12orf43Q96C57 262 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PDCD10Q9BUL8 212 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ARMC1Q9NVT9 282 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ADD3Q9UEY8 706 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 EBF1Q9UH73 591 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ATXN7L1Q9ULK2 861 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 POU1F1P28069 291 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CRABP2P29373 138 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CHRNA5P30532 468 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 NUDT2P50583 147 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 OR2B6P58173 313 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 C1QBPQ07021 282 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 KRR1Q13601 381 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 TSC22D1Q15714 1073 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 KRT39Q6A163 491 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 LDHAL6AQ6ZMR3 332 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CENPUQ71F23 418 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PAGE2Q7Z2X7 111 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 FBXO30Q8TB52 745 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 TEX47Q8TBZ9 253 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF274Q96GC6 653 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 WNT8AQ9H1J5 351 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ERVMER34-1Q9H9K5 563 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 GNEQ9Y223 722 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 VPS9D1Q9Y2B5 631 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CLDN25C9JDP6 229 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 AREL1O15033 823 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 CD44P16070 742 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 SLC9A1P19634 815 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 GUCY1A2P33402 732 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 STAT3P40763 770 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 COPAP53621 1224 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 DGUOKQ16854 277 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 NET1Q7Z628 596 aaPredicted RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 GPBP1Q86WP2 473 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ULK2Q8IYT8 1036 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PROX1Q92786 737 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 SERPINB13Q9UIV8 391 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 GMEB2Q9UKD1 530 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 PPM1HQ9ULR3 514 aa9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 SMG5Q9UPR3 1016 aaKnown RBP9.25□□□□□ -0.93
GTF2A1-203ENST00000553612 ACEP12821 1306 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 C5orf60A6NFR6 353 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 UBE2Q2LH0YL09 131 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 HUS1O60921 280 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 FCER1AP12319 257 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 GNL1P36915 607 aaPredicted RBP9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 PHKA2P46019 1235 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 RAB15P59190 212 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 FAM69CQ0P6D2 419 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 POLA2Q14181 598 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ZNF284Q2VY69 593 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 LGSNQ5TDP6 509 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 DSG4Q86SJ6 1040 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 MNTQ99583 582 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CXorf21Q9HAI6 301 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 TAGLN3Q9UI15 199 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ITM2AO43736 263 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 HSPA4LO95757 839 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ERVK-25P63136 954 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 METTL11BQ5VVY1 283 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ZBTB49Q6ZSB9 765 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 EXT2Q93063 718 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 CCDC74BQ96LY2 380 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 KCNK16Q96T55 309 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 ERVK-6Q9BXR3 956 aa9.24□□□□□ -0.93
GTF2A1-203ENST00000553612 WDR12Q9GZL7 423 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms