RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 DENND1BQ6P3S1 775 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 RFWD3Q6PCD5 774 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MTHFD1LQ6UB35 978 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MPZL3Q6UWV2 235 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CYP4V2Q6ZWL3 525 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ACAD11Q709F0 780 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MARK2Q7KZI7 788 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PHLDB2Q86SQ0 1253 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 NT5DC4Q86YG4 428 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MYLK4Q86YV6 388 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 RFX6Q8HWS3 928 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 TMEM126BQ8IUX1 230 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ANKMY2Q8IV38 441 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CDKL3Q8IVW4 592 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ZBTB8OSQ8IWT0 167 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 UNC45BQ8IWX7 931 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 HACE1Q8IYU2 909 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 GSDMBQ8TAX9 411 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PIP4K2CQ8TBX8 421 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SPATA18Q8TC71 538 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ISL2Q96A47 359 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 AZIN2Q96A70 460 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 E2F7Q96AV8 911 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ATG4CQ96DT6 458 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC10A4Q96EP9 437 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 DTNBP1Q96EV8 351 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ANKRD36BP1Q96IX9 119 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 NLRP4Q96MN2 994 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 OLFM3Q96PB7 478 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 RNF157Q96PX1 679 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM111AQ96PZ2 611 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ACO2Q99798 780 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 NAT9Q9BTE0 207 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MTMR12Q9C0I1 747 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 NMUR2Q9GZQ4 415 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 IFT122Q9HBG6 1241 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 USP29Q9HBJ7 922 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PTPRHQ9HD43 1115 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 EIF2B3Q9NR50 452 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 PAPOLBQ9NRJ5 636 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 HOMER2Q9NSB8 354 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 NRBP2Q9NSY0 501 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 DCTN4Q9UJW0 460 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 ITGA11Q9UKX5 1188 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 USP18Q9UMW8 372 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 SOX13Q9UN79 622 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 CHMP2BQ9UQN3 213 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 NOD1Q9Y239 953 aa5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 HBS1LQ9Y450 684 aaKnown RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 COL11A1P12107 1806 aaPredicted RBP5.45□□□□□ -1.54
TMEM55B-204ENST00000553602 MYH9P35579 1960 aaKnown RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 TCRBV7S3A2A0A539 114 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM170AA1A519 330 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 KLHL33A6NCF5 533 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC15A5A6NIM6 579 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 SDR42E2A6NKP2 422 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 C2CD4BA6NLJ0 364 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 HACD1B0YJ81 288 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 TRIM49D1C9J1S8 452 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 CASQ2O14958 399 aaPredicted RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 GLRA3O75311 464 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 CILPO75339 1184 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 LGR5O75473 907 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 GCATO75600 419 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 RFPL1O75677 317 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 KRT36O76013 467 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 KLHL2O95198 593 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 PRKCBP05771 671 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 BPGMP07738 259 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 VDRP11473 427 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 ANPEPP15144 967 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 ANK1P16157 1881 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 GPD1P21695 349 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 BGNP21810 368 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 KCNA3P22001 575 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 ACAT1P24752 427 aaKnown RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 GRK2P25098 689 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 MIPP30301 263 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 L1CAMP32004 1257 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 CPOXP36551 454 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 PTPN9P43378 593 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 NR2C2P49116 596 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 HK2P52789 917 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 SNX16P57768 344 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 YWHAGP61981 247 aaKnown RBP eCLIP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 PSMC1P62191 440 aaKnown RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 MRPS5P82675 430 aaKnown RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 GAD2Q05329 585 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 PTPN11Q06124 597 aaPredicted RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 BST1Q10588 318 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 DYNC1I2Q13409 638 aaKnown RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 SEMA5AQ13591 1074 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 RCN2Q14257 317 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 PDCD2Q16342 344 aaPredicted RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 FAM187BQ17R55 369 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF667Q5HYK9 610 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 RABGAP1LQ5R372 815 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 NOL9Q5SY16 702 aaKnown RBP5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 AP1ARQ63HQ0 302 aa5.44□□□□□ -1.54
TMEM55B-204ENST00000553602 NAIF1Q69YI7 327 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms