RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ATP2C1P98194 919 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-219ENST00000553488 TSPY1Q01534 308 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 NFE2Q16621 373 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CFAP221Q4G0U5 840 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 SCARA3Q6AZY7 606 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CRELD2Q6UXH1 353 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-219ENST00000553488 DTHD1Q6ZMT9 781 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 ARMCX6Q7L4S7 300 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 OSTM1Q86WC4 334 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 C12orf40Q86WS4 652 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 METTL23Q86XA0 190 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 SYT12Q8IV01 421 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 TMEFF1Q8IYR6 380 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 THEM5Q8N1Q8 247 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 PDCL2Q8N4E4 241 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CCDC33Q8N5R6 958 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 ARL14EPQ8N8R7 260 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-219ENST00000553488 IL17RCQ8NAC3 791 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 GALNT11Q8NCW6 608 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CCDC26Q8TAB7 109 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 FAM129BQ96TA1 746 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 PLIN2Q99541 437 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 LLPHQ9BRT6 129 aaKnown RBP7.8□□□□□ -1.16
ATXN3-219ENST00000553488 CAPN10Q9HC96 672 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 TRPC7Q9HCX4 862 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 FSCN3Q9NQT6 498 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 DPP3Q9NY33 737 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 UXTQ9UBK9 157 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-219ENST00000553488 PILRBQ9UKJ0 227 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 STYXL1Q9Y6J8 313 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 PTPRQQ9UMZ3 2332 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 MGAQ8IWI9 3026 aa7.8□□□□□ -1.16
ATXN3-219ENST00000553488 TMEM131Q92545 1883 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 HCRTO43612 131 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 OLFM2O95897 454 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 EPHA1P21709 976 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 ITPKAP23677 461 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 ACAT1P24752 427 aaKnown RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 NOS3P29474 1203 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 HOXD12P35452 270 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 KIR2DL1P43626 348 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 RPL10AP62906 217 aaKnown RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 MRPS21P82921 87 aaKnown RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 GTF2BQ00403 316 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 POU5F1Q01860 360 aaKnown RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 ZRSR1Q15695 479 aaKnown RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 SV2CQ496J9 727 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 SOWAHCQ53LP3 525 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 SPDYCQ5MJ68 293 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 LYSMD4Q5XG99 296 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 LPCAT2Q7L5N7 544 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 ALLCQ8N6M5 410 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 TMEM102Q8N9M5 508 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 TXNDC5Q8NBS9 432 aaKnown RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 WFDC12Q8WWY7 111 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 FAM84AQ96KN4 292 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 ZNF560Q96MR9 790 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 ACBD6Q9BR61 282 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 NUSAP1Q9BXS6 441 aaKnown RBP7.79□□□□□ -1.16
ATXN3-219ENST00000553488 LACRTQ9GZZ8 138 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 IKZF4Q9H2S9 585 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 SLC32A1Q9H598 525 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 PARVGQ9HBI0 331 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 BLOC1S4Q9NUP1 217 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 CKAP5Q14008 2032 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 KNTC1P50748 2209 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 SHROOM3Q8TF72 1996 aa7.79□□□□□ -1.16
ATXN3-219ENST00000553488 H0Y626 953 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 LEFTY2O00292 366 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 GABRDO14764 452 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 PHACTR2O75167 634 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 GJB3O75712 270 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 TRIM16O95361 564 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 KLF8O95600 359 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-219ENST00000553488 CD59P13987 128 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 ADSSP30520 456 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 EIF2DP41214 584 aaKnown RBP7.78□□□□□ -1.16
ATXN3-219ENST00000553488 PNPLA4P41247 253 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 DPP6P42658 865 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 MAGEA11P43364 429 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 SLC6A11P48066 632 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 SLC7A9P82251 487 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 HMGN5P82970 282 aaKnown RBP7.78□□□□□ -1.16
ATXN3-219ENST00000553488 GNL2Q13823 731 aaKnown RBP7.78□□□□□ -1.16
ATXN3-219ENST00000553488 KCNB1Q14721 858 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 ZNF423Q2M1K9 1284 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 HSF5Q4G112 596 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-219ENST00000553488 LMBRD2Q68DH5 695 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-219ENST00000553488 ADALQ6DHV7 355 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 Q6ZS46 218 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 FILIP1Q7Z7B0 1213 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 PDZD3Q86UT5 571 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 GPBP1Q86WP2 473 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 NT5DC4Q86YG4 428 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 CHCHD4Q8N4Q1 142 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 MYCT1Q8N699 235 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 KIAA1958Q8N8K9 716 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 TTC16Q8NEE8 873 aa7.78□□□□□ -1.16
ATXN3-219ENST00000553488 ZSWIM2Q8NEG5 633 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms