RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 NAA15Q9BXJ9 866 aaKnown RBP11.97□□□□□ -0.49
TMEM116-218ENST00000552839 ZNF518BQ9C0D4 1074 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 SYNCQ9H7C4 482 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 TSPAN16Q9UKR8 245 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 CAPN11Q9UMQ6 739 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 INVSQ9Y283 1065 aa11.97□□□□□ -0.49
TMEM116-218ENST00000552839 PI4KAP42356 2102 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 TMEM8BA6NDV4 472 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 SRRM3A6NNA2 597 aaPredicted RBP11.96□□□□□ -0.49
TMEM116-218ENST00000552839 CLDN5O00501 218 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 F11P03951 625 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 GYPCP04921 128 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 SETSIPP0DME0 302 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 CEACAM1P13688 526 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 CYP11B1P15538 503 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 DRD1P21728 446 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 GBP1P32455 592 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 GJA4P35212 333 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 AVPR1AP37288 418 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 DGKEP52429 567 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 ZNF132P52740 706 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 JAM2P57087 298 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 SNX16P57768 344 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.49
TMEM116-218ENST00000552839 DMC1Q14565 340 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 ACAP1Q15027 740 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 CCDC142Q17RM4 750 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 CFAP221Q4G0U5 840 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 FBXO43Q4G163 708 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 PPP1R26Q5T8A7 1209 aaPredicted RBP11.96□□□□□ -0.49
TMEM116-218ENST00000552839 VSTM1Q6UX27 236 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 LRRTM3Q86VH5 581 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 SLC47A2Q86VL8 602 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 ZNF677Q86XU0 584 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 PASD1Q8IV76 773 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 IPO4Q8TEX9 1081 aaKnown RBP11.96□□□□□ -0.49
TMEM116-218ENST00000552839 WHAMMQ8TF30 809 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 HNRNPABQ99729 332 aaKnown RBP11.96□□□□□ -0.49
TMEM116-218ENST00000552839 P2RY13Q9BPV8 354 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM116-218ENST00000552839 B3GNT5Q9BYG0 378 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 ST7Q9NRC1 585 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 TDP1Q9NUW8 608 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 TMLHEQ9NVH6 421 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 EHD2Q9NZN4 543 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 EBF1Q9UH73 591 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 ZMYM5Q9UJ78 669 aa11.96□□□□□ -0.49
TMEM116-218ENST00000552839 TNRC6BQ9UPQ9 1833 aaKnown RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 ATRXP46100 2492 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 PATE3B3GLJ2 98 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 KHNYNO15037 678 aaKnown RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 MFAP3LO75121 409 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 APBB3O95704 486 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 HAPLN1P10915 354 aaPredicted RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 HMGA1P17096 107 aaKnown RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 CSRP1P21291 193 aaKnown RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 TNFAIP3P21580 790 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 CYP2F1P24903 491 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 MAGEA11P43364 429 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 ADKP55263 362 aaKnown RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 MAP3K7CLP57077 242 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 GSDMDP57764 484 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 AMPD2Q01433 879 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 PMS2CLQ68D20 193 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 ARHGAP17Q68EM7 881 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 TXNDC8Q6A555 127 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 FAM171BQ6P995 826 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 SIX6OS1Q8N1H7 587 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 STKLD1Q8NE28 680 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 OR8K1Q8NGG5 319 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 BAP1Q92560 729 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 KIF9Q9HAQ2 790 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 LRRC4Q9HBW1 653 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 TMEM9BQ9NQ34 198 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 MAGED2Q9UNF1 606 aaPredicted RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 BZW2Q9Y6E2 419 aaKnown RBP11.95□□□□□ -0.5
TMEM116-218ENST00000552839 LAMA1P25391 3075 aa11.95□□□□□ -0.5
TMEM116-218ENST00000552839 CEP192Q8TEP8 1941 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ADAMTS9Q9P2N4 1935 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 F8VP50 259 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 RNF225M0QZC1 329 aaPredicted RBP11.94□□□□□ -0.5
TMEM116-218ENST00000552839 O00370 1275 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
TMEM116-218ENST00000552839 CALCAP01258 141 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 SERPING1P05155 500 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 DDX6P26196 483 aaKnown RBP eCLIP11.94□□□□□ -0.5
TMEM116-218ENST00000552839 CLCN1P35523 988 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 IRX4P78413 519 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 CDR2Q01850 454 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 RING1Q06587 406 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 CNGA2Q16280 664 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 DPY19L2P1Q6NXN4 242 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 CC2D1AQ6P1N0 951 aaPredicted RBP11.94□□□□□ -0.5
TMEM116-218ENST00000552839 LCLAT1Q6UWP7 414 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 FUKQ8N0W3 1084 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 ANKRD52Q8NB46 1076 aa11.94□□□□□ -0.5
TMEM116-218ENST00000552839 TMEM35BQ8NCS4 154 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms