RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 CPNE8Q86YQ8 564 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 SLC35F6Q8N357 371 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 ARFGAP1Q8N6T3 406 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 ARL14EPQ8N8R7 260 aaPredicted RBP4.43□□□□□ -1.7
ERBB3-220ENST00000552691 MAB21L3Q8N8X9 362 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 LRRC57Q8N9N7 239 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 LEMD2Q8NC56 503 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 TRIM58Q8NG06 486 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.43□□□□□ -1.7
ERBB3-220ENST00000552691 SHKBP1Q8TBC3 707 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 ADAM32Q8TC27 787 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 DQX1Q8TE96 717 aaKnown RBP4.43□□□□□ -1.7
ERBB3-220ENST00000552691 RNF139Q8WU17 664 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 FAM172AQ8WUF8 416 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 MRPS31Q92665 395 aaKnown RBP4.43□□□□□ -1.7
ERBB3-220ENST00000552691 PABPC5Q96DU9 382 aaKnown RBP4.43□□□□□ -1.7
ERBB3-220ENST00000552691 MSLNLQ96KJ4 702 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 GUCD1Q96NT3 240 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 ALS2CR12Q96Q35 445 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 GCNAQ96QF7 691 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 CYP2S1Q96SQ9 504 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 CDK5RAP1Q96SZ6 601 aaKnown RBP4.43□□□□□ -1.7
ERBB3-220ENST00000552691 TBCBQ99426 244 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 CNPY3Q9BT09 278 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 RNF38Q9H0F5 515 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 RAB6CQ9H0N0 254 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 ADAM7Q9H2U9 754 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 ATXN3LQ9H3M9 355 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 SMOC2Q9H3U7 446 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 GOLPH3Q9H4A6 298 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 WDR6Q9NNW5 1121 aaKnown RBP4.43□□□□□ -1.7
ERBB3-220ENST00000552691 MTMR10Q9NXD2 777 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 CLDND1Q9NY35 253 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 RRN3Q9NYV6 651 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 CALCOCO1Q9P1Z2 691 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 LCMT1Q9UIC8 334 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 CDH22Q9UJ99 828 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 DNMT3LQ9UJW3 386 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 STAP1Q9ULZ2 295 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 HYOU1Q9Y4L1 999 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 KIAA1549LQ6ZVL6 1849 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 COL6A3P12111 3177 aa4.43□□□□□ -1.7
ERBB3-220ENST00000552691 SYNJ2BP-COX16A0A087WUM0 186 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 TRAV19A0A0A6YYK7 116 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 SLC12A8A0AV02 714 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 XIRP2A4UGR9 3374 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 SOBPA7XYQ1 873 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ESPNB1AK53 854 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 IRAK2O43187 625 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 MSI1O43347 362 aaKnown RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 SPOPO43791 374 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ZNF500O60304 480 aaPredicted RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 OLFM2O95897 454 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 FTCDO95954 541 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 IGLV3-27P01718 113 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 FOSL2P15408 326 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 TCF4P15884 667 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 CEBPBP17676 345 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 PFKLP17858 780 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 FSHRP23945 695 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 IL1R2P27930 398 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 MIPP30301 263 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 GBP1P32455 592 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 MAN1A1P33908 653 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 RDXP35241 583 aaKnown RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 PCK1P35558 622 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 CXCR3P49682 368 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 KPNA1P52294 538 aaPredicted RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 TAS2R40P59535 323 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 GNG11P61952 73 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ETF1P62495 437 aaKnown RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 COG7P83436 770 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ZXDBP98169 803 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 SLC25A11Q02978 314 aaKnown RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 RING1Q06587 406 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 EFEMP1Q12805 493 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 NME3Q13232 169 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 NNTQ13423 1086 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 CBX2Q14781 532 aaPredicted RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 TEAD2Q15562 447 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 TRIP4Q15650 581 aaPredicted RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 CCDC85BQ15834 202 aaPredicted RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 HADHQ16836 314 aaKnown RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ATP13A4Q4VNC1 1196 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ARHGAP15Q53QZ3 475 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ZC3H12AQ5D1E8 599 aaKnown RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 BRMS1LQ5PSV4 323 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 ATAT1Q5SQI0 421 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 STXBP5Q5T5C0 1151 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 GPR158Q5T848 1215 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 MEI1Q5TIA1 1274 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 TXNRD3NBQ6F5E7 133 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 CES5AQ6NT32 575 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 SCYL2Q6P3W7 929 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 NYAP1Q6ZVC0 841 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 CYP4V2Q6ZWL3 525 aaPredicted RBP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 SND1Q7KZF4 910 aaKnown RBP eCLIP4.42□□□□□ -1.7
ERBB3-220ENST00000552691 PEX26Q7Z412 305 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 MIB1Q86YT6 1006 aa4.42□□□□□ -1.7
ERBB3-220ENST00000552691 CMTM8Q8IZV2 173 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms