RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CYP1A2P05177 515 aa11.14□□□□□ -0.63
TGFBR1-209ENST00000552516 GFAPP14136 432 aa11.14□□□□□ -0.63
TGFBR1-209ENST00000552516 AKR1A1P14550 325 aa11.14□□□□□ -0.63
TGFBR1-209ENST00000552516 PTPN1P18031 435 aaKnown RBP11.14□□□□□ -0.63
TGFBR1-209ENST00000552516 ARL2P36404 184 aa11.14□□□□□ -0.63
TGFBR1-209ENST00000552516 GRIA1P42261 906 aa11.14□□□□□ -0.63
TGFBR1-209ENST00000552516 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 E5RI56 91 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 STRNO43815 780 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 CKMP06732 381 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 TRIM32Q13049 653 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 KDM7AQ6ZMT4 941 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 TPGS1Q6ZTW0 290 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 STRA8Q7Z7C7 330 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 LDB1Q86U70 411 aaPredicted RBP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 NUP93Q8N1F7 819 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 APBA2Q99767 749 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 EGFL8Q99944 293 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 OMDQ99983 421 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MANSC1Q9H8J5 431 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 CAB39LQ9H9S4 337 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 RBM22Q9NW64 420 aaKnown RBP eCLIP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 TNFSF13BQ9Y275 285 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 PPP2R3BQ9Y5P8 575 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 EDN1P05305 212 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SERPINB5P36952 375 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 RAD23BP54727 409 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 STX3Q13277 289 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SNX17Q15036 470 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 BZW1Q7L1Q6 419 aaKnown RBP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 B3GALNT2Q8NCR0 500 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 ASIC4Q96FT7 647 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 HAPLN2Q9GZV7 340 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 PRDM12Q9H4Q4 367 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 PIDD1Q9HB75 910 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 ANLNQ9NQW6 1124 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MAN1C1Q9NR34 630 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 TSPAN1O60635 241 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 VAPBO95292 243 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 TFE3P19532 575 aaPredicted RBP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 GMPRP36959 345 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SLC6A3Q01959 620 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 OGDHQ02218 1023 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 TRPV6Q9H1D0 765 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MYL2P10916 166 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 IL1R2P27930 398 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MSX2P35548 267 aaPredicted RBP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MBTD1Q05BQ5 628 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 AUHQ13825 339 aaKnown RBP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 DPYSL3Q14195 570 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 BBS5Q8N3I7 341 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SCAMP5Q8TAC9 235 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 AZIN2Q96A70 460 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SPDL1Q96EA4 605 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MBOAT7Q96N66 472 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 RAB3IPQ96QF0 476 aaPredicted RBP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 B2RBV5 119 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 LIASO43766 372 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 TUBP50607 506 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MARSP56192 900 aaKnown RBP11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 CENPCQ03188 943 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 MAP2K5Q13163 448 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 ZNF697Q5TEC3 545 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SCLYQ96I15 445 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
TGFBR1-209ENST00000552516 DNALI1O14645 258 aaPredicted RBP11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 MSCO60682 206 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 ASGR1P07306 291 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 ATICP31939 592 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 PRKCZQ05513 592 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 DUPD1Q68J44 220 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 CMC1Q7Z7K0 106 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 CCDC185Q8N715 623 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 SLC40A1Q9NP59 571 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 TCRBV7S3A2A0A539 114 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 ODC1P11926 461 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 MMP8P22894 467 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 SNRPFP62306 86 aaKnown RBP11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 OLFML2BQ68BL8 750 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 TMCO2Q7Z6W1 182 aaPredicted RBP11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 EXOC3L1Q86VI1 746 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 SPATA24Q86W54 205 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 CARNMT1Q8N4J0 409 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 UPF1Q92900 1129 aaKnown RBP eCLIP11.12□□□□□ -0.638e-7■■■■□ 21.2
TGFBR1-209ENST00000552516 NDNQ99608 321 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 KCNH4Q9UQ05 1017 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 ERI2A8K979 691 aaKnown RBP11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 GPR182O15218 404 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 TBX18O95935 607 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 ATG16L1Q676U5 607 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 ILDR2Q71H61 639 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 FBXO41Q8TF61 875 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 VPS39Q96JC1 886 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 ITGA11Q9UKX5 1188 aa11.12□□□□□ -0.63
TGFBR1-209ENST00000552516 NUMA1Q14980 2115 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms