RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SCN4BQ8IWT1 228 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 MNS1Q8NEH6 495 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 ZNF384Q8TF68 577 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 ANKRD49Q8WVL7 239 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 TRIM43Q96BQ3 446 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 CDCA5Q96FF9 252 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 PGAP3Q96FM1 320 aaPredicted RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 SORCS2Q96PQ0 1159 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 RTKNQ9BST9 563 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 FUT8Q9BYC5 575 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 FTOQ9C0B1 505 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP44-208ENST00000552440 MTG2Q9H4K7 406 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 MID1IP1Q9NPA3 183 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 UCKL1Q9NWZ5 548 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 TAB2Q9NYJ8 693 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CGNQ9P2M7 1197 aaKnown RBP4.49□□□□□ -1.69
USP44-208ENST00000552440 EXTL2Q9UBQ6 330 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 DNAJB9Q9UBS3 223 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 LPAR3Q9UBY5 353 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 CAMK2AQ9UQM7 478 aa4.49□□□□□ -1.69
USP44-208ENST00000552440 EIF4G1Q04637 1599 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 H0YC42 278 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 RIPK2O43353 540 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 SUV39H1O43463 412 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 SMPD2O60906 423 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 NOL3O60936 208 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 TSC22D2O75157 780 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 METTL18O95568 372 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 OPN1MWP04001 364 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 OPN1MW2P0DN77 364 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 OPN1MW3P0DN78 364 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 NPPBP16860 134 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 TMOD1P28289 359 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 GCH1P30793 250 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 RARSP54136 660 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 MLLT6P55198 1093 aaPredicted RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 STARD6P59095 220 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 RPS3AP61247 264 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 MECOMQ03112 1051 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 PPP3CAQ08209 521 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 EIF2B5Q13144 721 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 SGCGQ13326 291 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 LASP1Q14847 261 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 SEC23BQ15437 767 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 SLC30A9Q6PML9 568 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 OLFM4Q6UX06 510 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 ARHGEF18Q6ZSZ5 1173 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 LPCAT2Q7L5N7 544 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 ULK2Q8IYT8 1036 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 KLHL36Q8N4N3 616 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 DPP10Q8N608 796 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 VGLL2Q8N8G2 317 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 CCDC150Q8NCX0 1101 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 DENND6BQ8NEG7 585 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 OR2I1PQ8NGU4 316 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 GPR150Q8NGU9 434 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 GAB3Q8WWW8 586 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 APOPT1Q96IL0 206 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 TRAPPC9Q96Q05 1148 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 WDR24Q96S15 920 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 SPXQ9BT56 116 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 TRIM54Q9BYV2 358 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 PITHD1Q9GZP4 211 aaPredicted RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 GREM2Q9H772 168 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 SUDS3Q9H7L9 328 aaPredicted RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 BARX1Q9HBU1 254 aaPredicted RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 SARS2Q9NP81 518 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 HCFC1R1Q9NWW0 138 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 UTP6Q9NYH9 597 aaKnown RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 C6orf203Q9P0P8 240 aaPredicted RBP4.48□□□□□ -1.69
USP44-208ENST00000552440 ACTR3BQ9P1U1 418 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 FTSJ1Q9UET6 329 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 CFAP45Q9UL16 551 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 HSF4Q9ULV5 492 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 USP18Q9UMW8 372 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 PCDHA6Q9UN73 950 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 WASF3Q9UPY6 502 aa4.48□□□□□ -1.69
USP44-208ENST00000552440 CCDC151A5D8V7 595 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 UBXN8O00124 270 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 EXOC3O60645 756 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 OPHN1O60890 802 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 FZD7O75084 574 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 COQ9O75208 318 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 CAMTA2O94983 1202 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 GGPS1O95749 300 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 FSHBP01225 129 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 GSPT1P15170 499 aaKnown RBP4.47□□□□□ -1.69
USP44-208ENST00000552440 ZNF28P17035 718 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 TACR2P21452 398 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 IL13P35225 146 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 PSMC2P35998 433 aaKnown RBP4.47□□□□□ -1.69
USP44-208ENST00000552440 MTHFRP42898 656 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 PAFAH1B1P43034 410 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 GPR15P49685 360 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 FLT3LGP49771 235 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 SULT1E1P49888 294 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 ARFIP2P53365 341 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 C21orf58P58505 322 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 PSMC6P62333 389 aa4.47□□□□□ -1.69
USP44-208ENST00000552440 PPP2CBP62714 309 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms