RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PDZD3Q86UT5 571 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 PLEKHO2Q8TD55 490 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 PARD3BQ8TEW8 1205 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 JAKMIP2Q96AA8 810 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 GPR174Q9BXC1 333 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 DNAI2Q9GZS0 605 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 SLC39A2Q9NP94 309 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 ITM2CQ9NQX7 267 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 OSER1Q9NX31 292 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 WSB2Q9NYS7 404 aaPredicted RBP14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 PLK2Q9NYY3 685 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 KIAA1522Q9P206 1035 aaPredicted RBP14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 USP36Q9P275 1121 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 PCOLCE2Q9UKZ9 415 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 MTMR6Q9Y217 621 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 SLC27A6Q9Y2P4 619 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 LOC400499M0QZD8 3231 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 PLXNB3Q9ULL4 1909 aa14.94□□□□□ -0.02
CHMP1A-210ENST00000551981 APC2O95996 2303 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 PTPRBP23467 1997 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 A0A1W2PQH9 124 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 STX6O43752 255 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 CBFA2T3O75081 653 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 VNN1O95497 513 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 ACO1P21399 889 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 CHKAP35790 457 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 MATKP42679 507 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 PSEN1P49768 467 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 DCAF12L1Q5VU92 463 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 Q6ZNB5 142 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 CLEC20AQ6ZU45 233 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 C12orf29Q8N999 325 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 PRCCQ92733 491 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 SIPA1Q96FS4 1042 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 ZNF396Q96N95 335 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 CDK5RAP1Q96SZ6 601 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 HNRNPABQ99729 332 aaKnown RBP14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 GAREM1Q9H706 876 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 PNPLA8Q9NP80 782 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 THAP10Q9P2Z0 257 aaPredicted RBP14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 HMGXB4Q9UGU5 601 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 NAGPAQ9UK23 515 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 FBXO10Q9UK96 956 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 CELSR3Q9NYQ7 3312 aa14.93□□□□□ -0.02
CHMP1A-210ENST00000551981 PVALEFA0A1B0GWK0 134 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 MDM4O15151 490 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 BCAT2O15382 392 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 CUTAO60888 179 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 PENKP01210 267 aaPredicted RBP14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 RALAP11233 206 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 ACADMP11310 421 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 IL12RB1P42701 662 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 TPMTP51580 245 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 MFAP3P55082 362 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 COL28A1Q2UY09 1125 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 GPRIN1Q7Z2K8 1008 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 TMPRSS6Q8IU80 811 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 ELMO3Q96BJ8 720 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 INTS4Q96HW7 963 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 CDC6Q99741 560 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 NUP58Q9BVL2 599 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 DCLK3Q9C098 648 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 MKRN2Q9H000 416 aaKnown RBP14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 BLZF1Q9H2G9 400 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 NMUR1Q9HB89 426 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 TM7SF3Q9NS93 570 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 NUDT5Q9UKK9 219 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 PCDHGB2Q9Y5G2 931 aa14.92□□□□□ -0.02
CHMP1A-210ENST00000551981 METTL12A8MUP2 240 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 HHLA1C9JL84 531 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 POLR2DO15514 142 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 FLRT2O43155 660 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 CILPO75339 1184 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 STC2O76061 302 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 ASS1P00966 412 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 CYBBP04839 570 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 PIK3CAP42336 1068 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 ASPAP45381 313 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 COG7P83436 770 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 ENPP2Q13822 863 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 SUZ12Q15022 739 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 EIF4HQ15056 248 aaKnown RBP14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 HLA-BQ31612 363 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 ZACNQ401N2 412 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 FYB2Q5VWT5 728 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 SHC4Q6S5L8 630 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 ANKS1BQ7Z6G8 1248 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 SLCO6A1Q86UG4 719 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 ZNF276Q8N554 614 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 MDM1Q8TC05 714 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 CYFIP2Q96F07 1278 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 IMPG2Q9BZV3 1241 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 PCED1AQ9H1Q7 454 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 CLIC5Q9NZA1 410 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 CKAP5Q14008 2032 aa14.91□□□□□ -0.02
CHMP1A-210ENST00000551981 KCNJ18B7U540 433 aa14.9□□□□□ -0.02
CHMP1A-210ENST00000551981 YEATS4O95619 227 aa14.9□□□□□ -0.02
CHMP1A-210ENST00000551981 IGLV3-19P01714 112 aa14.9□□□□□ -0.02
CHMP1A-210ENST00000551981 CASP1P29466 404 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms