RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 DEUP1Q05D60 604 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 DSC1Q08554 894 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 SLC10A2Q12908 348 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 XRCC4Q13426 336 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 HIF1AQ16665 826 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 MSS51Q4VC12 460 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 CCDC38Q502W7 563 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 CLLU1OSQ5K130 101 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 HP1BP3Q5SSJ5 553 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 FNBP1LQ5T0N5 605 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 PSTKQ8IV42 348 aaKnown RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 BCAS4Q8TDM0 211 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 ATXN2LQ8WWM7 1075 aaKnown RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 QKIQ96PU8 341 aaKnown RBP eCLIP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 KCNK16Q96T55 309 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 ACBD6Q9BR61 282 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 EPN3Q9H201 632 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 POPDC2Q9HBU9 364 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 HMX1Q9NP08 348 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 STARD7Q9NQZ5 370 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 TMPRSS4Q9NRS4 437 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 ETNK2Q9NVF9 386 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 PAK5Q9P286 719 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 RCOR3Q9P2K3 495 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 XPO7Q9UIA9 1087 aaKnown RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 DSEQ9UL01 958 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 ZMYND8Q9ULU4 1186 aaPredicted RBP11.95□□□□□ -0.5
RAB5C-208ENST00000551338 PHF24Q9UPV7 400 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 NAALADL1Q9UQQ1 740 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 HEY1Q9Y5J3 304 aa11.95□□□□□ -0.5
RAB5C-208ENST00000551338 NYNRINQ9P2P1 1898 aaKnown RBP11.94□□□□□ -0.5
RAB5C-208ENST00000551338 TMEM189-UBE2V1I3L0A0 370 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 ARVCFO00192 962 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 CHADO15335 359 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 MFSD11O43934 449 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 DDHD2O94830 711 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 LTFP02788 710 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 TYMPP19971 482 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 SEC24CP53992 1094 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 GPX6P59796 221 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 FAM189BP81408 668 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 RNASELQ05823 741 aaKnown RBP11.94□□□□□ -0.5
RAB5C-208ENST00000551338 CBLBQ13191 982 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 SLC45A4Q5BKX6 768 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 FAM182AQ5T1J6 154 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 DCLRE1AQ6PJP8 1040 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 VSTM1Q6UX27 236 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 LRRTM3Q86VH5 581 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 ANKMY2Q8IV38 441 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 ZBED8Q8IZ13 594 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 CYP4X1Q8N118 509 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 SCML4Q8N228 414 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 RIBC1Q8N443 379 aaPredicted RBP11.94□□□□□ -0.5
RAB5C-208ENST00000551338 RNF139Q8WU17 664 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 ARHGEF2Q92974 986 aaKnown RBP11.94□□□□□ -0.5
RAB5C-208ENST00000551338 NTAN1Q96AB6 310 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 CENPTQ96BT3 561 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 OLFM3Q96PB7 478 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 XPO6Q96QU8 1125 aaKnown RBP11.94□□□□□ -0.5
RAB5C-208ENST00000551338 WDR6Q9NNW5 1121 aaKnown RBP11.94□□□□□ -0.5
RAB5C-208ENST00000551338 PIGVQ9NUD9 493 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 DOCK4Q8N1I0 1966 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 MYLKQ15746 1914 aa11.94□□□□□ -0.5
RAB5C-208ENST00000551338 SYNJ2BP-COX16A0A087WUM0 186 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 FOXO6A8MYZ6 492 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 E7EVH7 732 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 H3BRJ5 948 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 CDH16O75309 829 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 DGKIO75912 1065 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 EOMESO95936 686 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 USP17L7P0C7H9 530 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 VAV1P15498 845 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 CREB1P16220 341 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 BDNFP23560 247 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 ATP5DP30049 168 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 ARL4AP40617 200 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 MAGEA6P43360 314 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 CCT5P48643 541 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 NR2C2P49116 596 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 APLP1P51693 650 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 SCAPQ12770 1279 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 SEMA3BQ13214 749 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 EFHC2Q5JST6 749 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 FAXCQ5TGI0 409 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 OVOS1Q6IE37 1185 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 KCNT2Q6UVM3 1135 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 GLB1LQ6UWU2 654 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 CAPN12Q6ZSI9 719 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 SLC24A5Q71RS6 500 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 TAOK1Q7L7X3 1001 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 NLRP14Q86W24 1093 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 ZNF280BQ86YH2 543 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 TDRPQ86YL5 185 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 COLGALT2Q8IYK4 626 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
RAB5C-208ENST00000551338 SLC7A14Q8TBB6 771 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms