RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SH3GLB2Q9NR46 395 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 BLOC1S4Q9NUP1 217 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 RIC8BQ9NVN3 520 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 GID8Q9NWU2 228 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 C6orf203Q9P0P8 240 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 DNMT3BQ9UBC3 853 aaKnown RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 TAGLN3Q9UI15 199 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 PCDHGB4Q9UN71 923 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 FAF1Q9UNN5 650 aaPredicted RBP5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 SORCS3Q9UPU3 1222 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 DNAJC16Q9Y2G8 782 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 RNF11Q9Y3C5 154 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 TSC22D4Q9Y3Q8 395 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 PCDHGB5Q9Y5G0 923 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 PCDHA2Q9Y5H9 948 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 COL4A3BPQ9Y5P4 624 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 MAD1L1Q9Y6D9 718 aa5.5□□□□□ -1.53
LSM3P2-201ENST00000551246 SYNGAP1Q96PV0 1343 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 CFAP69A5D8W1 941 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 NOTOA8MTQ0 251 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 FAM155AB1AL88 458 aaPredicted RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 H3BNH8 94 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SCO2O43819 266 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 FAM189A1O60320 539 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 DKC1O60832 514 aaKnown RBP eCLIP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 CIB2O75838 187 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ZBTB11O95625 1053 aaPredicted RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SRGAP2CP0DJJ0 459 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PLCG1P19174 1290 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 AOC1P19801 751 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PMLP29590 882 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ADORA1P30542 326 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 S100A5P33763 92 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PHBP35232 272 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 COPB2P35606 906 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 CETN2P41208 172 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ETV4P43268 484 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 EIF2B2P49770 351 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 MXI1P50539 228 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 AP3M2P53677 418 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 NCKAP1LP55160 1127 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ARL4CP56559 192 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 NOP14P78316 857 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 FKBP3Q00688 224 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 CD300CQ08708 224 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 TROAPQ12815 778 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ZBTB17Q13105 803 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 EIF2B5Q13144 721 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SELENBP1Q13228 472 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 STX3Q13277 289 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ORC2Q13416 577 aaPredicted RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 WTAPQ15007 396 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 TNIP1Q15025 636 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 FXNQ16595 210 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ZBED5Q49AG3 693 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 EFHC1Q5JVL4 640 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 WDR45BQ5MNZ6 344 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 CCNJQ5T5M9 372 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 C6orf163Q5TEZ5 329 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 LPCAT4Q643R3 524 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 TTBK2Q6IQ55 1244 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 KIAA1841Q6NSI8 718 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 LMBR1LQ6UX01 489 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 LINC00299Q6ZSB3 139 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 HAUS6Q7Z4H7 955 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 VPS36Q86VN1 386 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ANKLE2Q86XL3 938 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 GALNT13Q8IUC8 556 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 RTKN2Q8IZC4 609 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 IFNL3Q8IZI9 196 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 TTC5Q8N0Z6 440 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SMG8Q8ND04 991 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ADCY4Q8NFM4 1077 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ZNF420Q8TAQ5 688 aaPredicted RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PRPF31Q8WWY3 499 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PSPC1Q8WXF1 523 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ATL1Q8WXF7 558 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 TRIB2Q92519 343 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 MCUR1Q96AQ8 359 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 WDR89Q96FK6 387 aaPredicted RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 OXNAD1Q96HP4 312 aaPredicted RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PRPF18Q99633 342 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SPOCK3Q9BQ16 436 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ZSWIM1Q9BR11 485 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 HAUS8Q9BT25 410 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ZC3H12CQ9C0D7 883 aaKnown RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 B3GNT4Q9C0J1 378 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 HOXD1Q9GZZ0 328 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC113Q9H0I3 377 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 HIPK3Q9H422 1215 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 TRABDQ9H4I3 376 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 EHD1Q9H4M9 534 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ARMC7Q9H6L4 198 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 FKBP14Q9NWM8 211 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 ANKMY1Q9P2S6 941 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 RABL2AQ9UBK7 228 aaPredicted RBP5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC24A2Q9UI40 661 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PSMD13Q9UNM6 376 aa5.49□□□□□ -1.53
LSM3P2-201ENST00000551246 PRELID1Q9Y255 219 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms