RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 TRIM58Q8NG06 486 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.73□□□□□ -0.69
RAB5C-207ENST00000550504 CALR3Q96L12 384 aaKnown RBP10.73□□□□□ -0.69
RAB5C-207ENST00000550504 CYP2S1Q96SQ9 504 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 OLA1Q9NTK5 396 aaKnown RBP10.73□□□□□ -0.69
RAB5C-207ENST00000550504 DDIT4Q9NX09 232 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 MARCH2Q9P0N8 246 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 PCSK1NQ9UHG2 260 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 LCMT1Q9UIC8 334 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 PACSIN2Q9UNF0 486 aaPredicted RBP10.73□□□□□ -0.69
RAB5C-207ENST00000550504 NCOR1O75376 2440 aa10.73□□□□□ -0.69
RAB5C-207ENST00000550504 OBSL1O75147 1896 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 DOCK6Q96HP0 2047 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 SLC12A8A0AV02 714 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 ZNF197O14709 1029 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 IRAK2O43187 625 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 NCK2O43639 380 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 MOSPD3O75425 235 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 LRCH4O75427 683 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 OAS1P00973 400 aaKnown RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 HMBSP08397 361 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 HOXB8P17481 243 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 GBP1P32455 592 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 MAN1A1P33908 653 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 SLC1A1P43005 524 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 DNA2P51530 1060 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 TAS2R40P59535 323 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 SKIV2LQ15477 1246 aaKnown RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 CTC1Q2NKJ3 1217 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 ARHGAP15Q53QZ3 475 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 PRSS36Q5K4E3 855 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 GPR158Q5T848 1215 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 MSANTD2Q6P1R3 559 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 SLFN11Q7Z7L1 901 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 TADA2BQ86TJ2 420 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 NT5DC3Q86UY8 548 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 FAM131BQ86XD5 332 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 MAB21L3Q8N8X9 362 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 LEMD2Q8NC56 503 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 TTC16Q8NEE8 873 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 ITFG1Q8TB96 612 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 CENPIQ92674 756 aaPredicted RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 RNF34Q969K3 372 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 NT5C3BQ969T7 300 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 WDR24Q96S15 920 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 SLC22A12Q96S37 553 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 CDK5RAP1Q96SZ6 601 aaKnown RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 RNF38Q9H0F5 515 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 SLITRK6Q9H5Y7 841 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 ZWILCHQ9H900 591 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 PIGVQ9NUD9 493 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 RRN3Q9NYV6 651 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 DNMT3LQ9UJW3 386 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 AMFRQ9UKV5 643 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 MRPS23Q9Y3D9 190 aaKnown RBP10.72□□□□□ -0.69
RAB5C-207ENST00000550504 C2orf16Q68DN1 1984 aa10.72□□□□□ -0.69
RAB5C-207ENST00000550504 TRAV19A0A0A6YYK7 116 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 ENC1O14682 589 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 TRANK1O15050 2925 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 IRF1P10914 325 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 MBL2P11226 248 aaPredicted RBP10.71□□□□□ -0.69
RAB5C-207ENST00000550504 CEBPBP17676 345 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 HDCP19113 662 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 FSHRP23945 695 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 MIPP30301 263 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 LTBRP36941 435 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 TUBP50607 506 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 TBX4P57082 545 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 ACAP1Q15027 740 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 CES5AQ6NT32 575 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 SYT10Q6XYQ8 523 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 NYAP1Q6ZVC0 841 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 SND1Q7KZF4 910 aaKnown RBP eCLIP10.71□□□□□ -0.69
RAB5C-207ENST00000550504 STRADAQ7RTN6 431 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 PABPC5Q96DU9 382 aaKnown RBP10.71□□□□□ -0.69
RAB5C-207ENST00000550504 SERPINB11Q96P15 392 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 PEBP4Q96S96 227 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 NOTCH4Q99466 2003 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 SLC46A2Q9BY10 475 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 SMG9Q9H0W8 520 aaKnown RBP10.71□□□□□ -0.69
RAB5C-207ENST00000550504 ANAPC1Q9H1A4 1944 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 S1PR5Q9H228 398 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 ADAM7Q9H2U9 754 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 DNAI1Q9UI46 699 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 USP18Q9UMW8 372 aa10.71□□□□□ -0.69
RAB5C-207ENST00000550504 CLUHO75153 1309 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 H3BQ06 376 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-207ENST00000550504 PRPSAP2O60256 369 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 ENDOD1O94919 500 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 PAPLNO95428 1278 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 F9P00740 461 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 IGLV3-25P01717 112 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 CKMP06732 381 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 IL1R2P27930 398 aa10.7□□□□□ -0.7
RAB5C-207ENST00000550504 PCK1P35558 622 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms