RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 DPYSL2Q16555 572 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 CYP1B1Q16678 543 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 PLPP4Q5VZY2 271 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 LILRA6Q6PI73 481 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 GPR161Q8N6U8 529 aaKnown RBP12.61□□□□□ -0.39
CACNB3-213ENST00000550064 MRPL43Q8N983 215 aaKnown RBP12.61□□□□□ -0.39
CACNB3-213ENST00000550064 RNF139Q8WU17 664 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 C1orf54Q8WWF1 131 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 CASP10Q92851 521 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 MAGOHBQ96A72 148 aaKnown RBP12.61□□□□□ -0.39
CACNB3-213ENST00000550064 KCTD15Q96SI1 283 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-213ENST00000550064 CALN1Q9BXU9 219 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 EMILIN2Q9BXX0 1053 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 SMOC2Q9H3U7 446 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
CACNB3-213ENST00000550064 ANKZF1Q9H8Y5 726 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 TLR9Q9NR96 1032 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 TLR8Q9NR97 1041 aaKnown RBP12.61□□□□□ -0.39
CACNB3-213ENST00000550064 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 CLIC5Q9NZA1 410 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 FBXW11Q9UKB1 542 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 EFR3BQ9Y2G0 817 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 R3HDM2Q9Y2K5 976 aaKnown RBP12.61□□□□□ -0.39
CACNB3-213ENST00000550064 INSL5Q9Y5Q6 135 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 IRAK3Q9Y616 596 aa12.61□□□□□ -0.39
CACNB3-213ENST00000550064 C2orf71A6NGG8 1288 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 GRM6O15303 877 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 IRAK2O43187 625 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 TJP3O95049 919 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 CSPG5O95196 566 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 ADH1AP07327 375 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 CSH1P0DML2 217 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 CSH2P0DML3 217 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 RARGP13631 454 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 KLRC2P26717 231 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 PBX2P40425 430 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 ERVK-21P61565 698 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 EIF4EBP2Q13542 120 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 CAMK1Q14012 370 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 GLE1Q53GS7 698 aaKnown RBP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 CCDC70Q6NSX1 233 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 C8orf74Q6P047 294 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 MSANTD2Q6P1R3 559 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 BBS12Q6ZW61 710 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 SND1Q7KZF4 910 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 RFX6Q8HWS3 928 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 PSTKQ8IV42 348 aaKnown RBP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 MAP7D3Q8IWC1 876 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 TNS4Q8IZW8 715 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 HDAC7Q8WUI4 952 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 NTAN1Q96AB6 310 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 SAMD11Q96NU1 681 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 TGS1Q96RS0 853 aaKnown RBP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 GDF15Q99988 308 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 DCLK3Q9C098 648 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 ANLNQ9NQW6 1124 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNB3-213ENST00000550064 MTMR10Q9NXD2 777 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 SFMBT1Q9UHJ3 866 aa12.6□□□□□ -0.39
CACNB3-213ENST00000550064 I6L893 689 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-213ENST00000550064 DYNC1I1O14576 645 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 RAD51CO43502 376 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 CST8O60676 142 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 LPXNO60711 386 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 CHRNA3P32297 505 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 IRS1P35568 1242 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 PTGIRP43119 386 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 EPHB3P54753 998 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 AIF1P55008 147 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 SLC7A5Q01650 507 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 SCAPQ12770 1279 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 PLD1Q13393 1074 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 GPM6BQ13491 265 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 SNX1Q13596 522 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 VEPH1Q14D04 833 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 TAF12Q16514 161 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 CCNG2Q16589 344 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 ANKRD20A8PQ5CZ79 823 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 PPP6R3Q5H9R7 873 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-213ENST00000550064 TTC27Q6P3X3 843 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 DNAJB7Q7Z6W7 309 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-213ENST00000550064 KREMEN2Q8NCW0 462 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 PDZD8Q8NEN9 1154 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 CCDC26Q8TAB7 109 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 MICAL1Q8TDZ2 1067 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 ATG4AQ8WYN0 398 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 OVCA2Q8WZ82 227 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 RNF34Q969K3 372 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 MYRFLQ96LU7 910 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 RNF157Q96PX1 679 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 PNKPQ96T60 521 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 FAM118BQ9BPY3 351 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 MAK16Q9BXY0 300 aaKnown RBP12.59□□□□□ -0.39
CACNB3-213ENST00000550064 PARD6BQ9BYG5 372 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 PLEKHA4Q9H4M7 779 aa12.59□□□□□ -0.39
CACNB3-213ENST00000550064 WDCPQ9H6R7 721 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms